RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 LOXL4Q96JB6 756 aa13□□□□□ -0.33
PFDN5-207ENST00000549759 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
PFDN5-207ENST00000549759 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
PFDN5-207ENST00000549759 ZDHHC6Q9H6R6 413 aa13□□□□□ -0.33
PFDN5-207ENST00000549759 WSB2Q9NYS7 404 aaPredicted RBP13□□□□□ -0.33
PFDN5-207ENST00000549759 PACSIN2Q9UNF0 486 aaPredicted RBP13□□□□□ -0.33
PFDN5-207ENST00000549759 A0A1W2PP55 124 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 LRRC72A6NJI9 287 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 DDX3YO15523 660 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 MTSS1O43312 755 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF189O75820 626 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 MAP3K6O95382 1288 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 PEX11BO96011 259 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 APOC2P02655 101 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 DPP6P42658 865 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 SCNN1BP51168 640 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 AP1S1P61966 158 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 ITKQ08881 620 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 XRCC4Q13426 336 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 PLK5Q496M5 336 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 RALGPS1Q5JS13 557 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 SYCP2LQ5T4T6 812 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 GDPD4Q6W3E5 623 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 SRLQ86TD4 932 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 HCAR2Q8TDS4 363 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF641Q96N77 438 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TUBGCP5Q96RT8 1024 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 LGMNQ99538 433 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 HDAC8Q9BY41 377 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 DUSP15Q9H1R2 295 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 NEUROG2Q9H2A3 272 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 ATP13A3Q9H7F0 1226 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 RBM22Q9NW64 420 aaKnown RBP eCLIP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 EVLQ9UI08 416 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 SARDHQ9UL12 918 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 TPX2Q9ULW0 747 aaKnown RBP12.99□□□□□ -0.33
PFDN5-207ENST00000549759 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 WASF2Q9Y6W5 498 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 MIA3Q5JRA6 1907 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
PFDN5-207ENST00000549759 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 A0A1W2PQ67 120 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 HACD1B0YJ81 288 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 CTSLP07711 333 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ITGB7P26010 798 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 SERPINA4P29622 427 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 POLR2LP62875 67 aaKnown RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 BCL2L1Q07817 233 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF211Q13398 564 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF805Q5CZA5 627 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 SEL1L2Q5TEA6 688 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 PMS2CLQ68D20 193 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 NPNTQ6UXI9 565 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 REXO1L1PQ8IX06 675 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 FRMD1Q8N878 549 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 OR6K2Q8NGY2 324 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 OR14C36Q8NHC7 312 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 MAML1Q92585 1016 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 RAB7BQ96AH8 199 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 HAUS1Q96CS2 278 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF419Q96HQ0 510 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 EXOC2Q96KP1 924 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 GPR174Q9BXC1 333 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 CARD9Q9H257 536 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 SAE1Q9UBE0 346 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 MBD1Q9UIS9 605 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 GMEB2Q9UKD1 530 aa12.98□□□□□ -0.33
PFDN5-207ENST00000549759 SMG5Q9UPR3 1016 aaKnown RBP12.98□□□□□ -0.33
PFDN5-207ENST00000549759 ZNF318Q5VUA4 2279 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3EA0A087X179 549 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3KA0A087X1G2 549 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3FA6NER0 549 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-207ENST00000549759 FAM47DPA6NHR8 397 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 KCNK3O14649 394 aa12.97□□□□□ -0.33
PFDN5-207ENST00000549759 INSIG1O15503 277 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms