RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 VAPBO95292 243 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 RAD23BP54727 409 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 NR6A1Q15406 480 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 KRT73Q86Y46 540 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CREG2Q8IUH2 290 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 ZNF248Q8NDW4 579 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CD101Q93033 1021 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 PHF21AQ96BD5 680 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 FAM120BQ96EK7 910 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 COPS8Q99627 209 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC25A51Q9H1U9 297 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 RPP40O75818 363 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 LRRC32Q14392 662 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 ANXA8L1Q5VT79 327 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CYP20A1Q6UW02 462 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 ZNF783Q6ZMS7 281 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 P3H2Q8IVL5 708 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 C1orf127Q8N9H9 656 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 LPPQ93052 612 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 THOC1Q96FV9 657 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 THUMPD3Q9BV44 507 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 KLC4Q9NSK0 619 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 COL20A1Q9P218 1284 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CFAP97Q9P2B7 532 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 WARS2Q9UGM6 360 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 NR2E1Q9Y466 385 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 H3BM21 787 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 M0R2N6 131 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CCNT2O60583 730 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 KRT75O95678 551 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 LATS1O95835 1130 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 ALBP02768 609 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CCL5P13501 91 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 NFKB1P19838 968 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CD86P42081 329 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC5A3P53794 718 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 LILRA4P59901 499 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 PFKPQ01813 784 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 CACNG1Q06432 222 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 USP4Q13107 963 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 TEX44Q53QW1 395 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 OSBPL2Q9H1P3 480 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 GBA3Q9H227 469 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 ACSS3Q9H6R3 686 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.91
PPFIA2-216ENST00000549396 AIM2O14862 343 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ALOX15BO15296 676 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SLC35G4P0C7Q5 338 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 OGNP20774 298 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 RPA3P35244 121 aaPredicted RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 CCNFP41002 786 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 CAPZA2P47755 286 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 RAB10P61026 200 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 TAF10Q12962 218 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SQLEQ14534 574 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 WASHC2DQ5SRD0 308 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 DNAAF5Q86Y56 855 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SEMA3CQ99985 751 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 STYXL1Q9Y6J8 313 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 PDE9AO76083 593 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 EPB42P16452 691 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 LBPP18428 481 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 PTPN4P29074 926 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 HNRNPDQ14103 355 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 NDUFA9Q16795 377 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 AAK1Q2M2I8 961 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 FAM98BQ52LJ0 330 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ANKS1BQ7Z6G8 1248 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 RTL3Q8N8U3 475 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 KYQ8NBH2 561 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ELMO1Q92556 727 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 CNDP1Q96KN2 507 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 FAM118BQ9BPY3 351 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 COLEC10Q9Y6Z7 277 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 A0A1W2PQH9 124 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 MEI4A8MW99 385 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 TGDSO95455 350 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 PSMB4P28070 264 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SERPINB3P29508 390 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SPAM1P38567 509 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 RPL14P50914 215 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 BLKP51451 505 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ACSM2AQ08AH3 577 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 RASA2Q15283 850 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 LSM12Q3MHD2 195 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 SAMD4BQ5PRF9 694 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 PLPP4Q5VZY2 271 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 ACSM2BQ68CK6 577 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 OTOP3Q7RTS5 596 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 TMPRSS6Q8IU80 811 aa9.33□□□□□ -0.92
PPFIA2-216ENST00000549396 CMTR2Q8IYT2 770 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms