RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 PRPF19Q9UMS4 504 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 SOX11P35716 441 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 PPIL2Q13356 520 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 PPP1R3AQ16821 1122 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 NADK2Q4G0N4 442 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 IL23RQ5VWK5 629 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 ARMC3Q5W041 872 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 FAM35AQ86V20 835 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 MFSD6LQ8IWD5 586 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 HIC2Q96JB3 615 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 SLC2A13Q96QE2 648 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 C1QTNF1Q9BXJ1 281 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 FSD1LQ9BXM9 530 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 TRPV6Q9H1D0 765 aa12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-219ENST00000549151 CASQ2O14958 399 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 GJA5P36382 358 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 RAB10P61026 200 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 XIAPP98170 497 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ITKQ08881 620 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 AGKQ53H12 422 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 PITRM1Q5JRX3 1037 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 LDB1Q86U70 411 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ZNF354CQ86Y25 554 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 TXNDC5Q8NBS9 432 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 HEXDCQ8WVB3 486 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ISL2Q96A47 359 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 PPWD1Q96BP3 646 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 BTBD9Q96Q07 612 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 IL1RL2Q9HB29 575 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 COMMD3-BMI1R4GMX3 469 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 LTBP3Q9NS15 1303 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 MAGEB16A2A368 324 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 GPC4O75487 556 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 RNASEH2AO75792 299 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 APOA4P06727 396 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SMIM18P0DKX4 95 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SLC1A2P43004 574 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 RPS6KA3P51812 740 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 MAP7Q14244 749 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 DUSP28Q4G0W2 176 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 RBM20Q5T481 1227 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SMYD5Q6GMV2 418 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 CNSTQ6PJW8 725 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 PGAM4Q8N0Y7 254 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ZMIZ2Q8NF64 920 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 STYXQ8WUJ0 223 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 HDAC11Q96DB2 347 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 GAD1Q99259 594 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 TBL1YQ9BQ87 522 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 MRPL1Q9BYD6 325 aaKnown RBP12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 ZBTB26Q9HCK0 441 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 TRHDEQ9UKU6 1024 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 KCNH4Q9UQ05 1017 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 SNX13Q9Y5W8 968 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 TTC3P53804 2025 aa12.07□□□□□ -0.48
RAPGEF3-219ENST00000549151 NCAM2O15394 837 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 H2AFYO75367 372 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 TFAP2AP05549 437 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 BDNFP23560 247 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 BEX3Q00994 111 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 ZNF789Q5FWF6 425 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 TAC4Q86UU9 113 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 OR9I1Q8NGQ6 314 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PAAF1Q9BRP4 392 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 RIMS3Q9UJD0 308 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 TCAF2A6NFQ2 919 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 ERI2A8K979 691 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 C9JVG2 144 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PDHXO00330 501 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PTGESO14684 152 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 MSI1O43347 362 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 KCNA5P22460 613 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 CLCNKBP51801 687 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PSME3P61289 254 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 MYBPC1Q00872 1141 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 GALNT2Q10471 571 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 GRM2Q14416 872 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 UBXN11Q5T124 520 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 METTL25Q8N6Q8 603 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 B4GALNT2Q8NHY0 566 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 SLC10A4Q96EP9 437 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 NCKIPSDQ9NZQ3 722 aa12.06□□□□□ -0.48
RAPGEF3-219ENST00000549151 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms