RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 NOL6Q9H6R4 1146 aaKnown RBP12.88□□□□□ -0.35
SCAF11-209ENST00000547018 SARS2Q9NP81 518 aaKnown RBP12.88□□□□□ -0.35
SCAF11-209ENST00000547018 ARHGEF38Q9NXL2 777 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 DCDC2Q9UHG0 476 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
SCAF11-209ENST00000547018 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■■■■ 91.6
SCAF11-209ENST00000547018 FAM95CA0A1B0GW59 222 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 ZNF487B1APH4 448 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 CFLARO15519 480 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 CABYRO75952 493 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 ANP32DO95626 131 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 IGHA2P01877 340 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PGM1P36871 562 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 SERPINB8P50452 374 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 TBATAQ96M53 351 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PHACTR1Q9C0D0 580 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCAF11-209ENST00000547018 XPR1Q9UBH6 696 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
SCAF11-209ENST00000547018 PDE5AO76074 875 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 FGF3P11487 239 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 ARSDP51689 593 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 LIMK2P53671 638 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 IRF5Q13568 498 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 KPNB1Q14974 876 aaKnown RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 HSF5Q4G112 596 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PIM3Q86V86 326 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 ATP6V0D2Q8N8Y2 350 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MRGPRX2Q96LB1 330 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 CADM1Q9BY67 442 aaKnown RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 OSBPL2Q9H1P3 480 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 FAM96AQ9H5X1 160 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 ARHGEF3Q9NR81 526 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 THAP1Q9NVV9 213 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MOXD2PA6NHM9 499 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MGRN1O60291 552 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 USP1O94782 785 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 OAZ2O95190 189 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 CCNCP24863 283 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 RASSF2P50749 326 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 BFSP2Q13515 415 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TMEM198Q66K66 360 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TMEM135Q86UB9 458 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 OR13C4Q8NGS5 318 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PIWIL2Q8TC59 973 aaKnown RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 RAB3IPQ96QF0 476 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 ACE2Q9BYF1 805 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TAS2R1Q9NYW7 299 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 FBXO5Q9UKT4 447 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SOX13Q9UN79 622 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SORBS2O94875 1100 aaKnown RBP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 GM2AP17900 193 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SOX11P35716 441 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 NPY2RP49146 381 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SLC18A1P54219 525 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 GEMP55040 296 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 OCRLQ01968 901 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 IHHQ14623 411 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 GPNMBQ14956 572 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 PCID2Q5JVF3 399 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MBLAC2Q68D91 279 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 KCTD11Q693B1 232 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 HAPLN3Q96S86 360 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 TM6SF2Q9BZW4 377 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCAF11-209ENST00000547018 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
SCAF11-209ENST00000547018 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ZBBXA8MT70 800 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 F5H5T6 163 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 GPR39O43194 453 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PROCP04070 461 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 HDCP19113 662 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 HCAR3P49019 387 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 STEAP4Q687X5 459 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 WBP2Q969T9 261 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TTC1Q99614 292 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms