RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 ADAMTS7Q9UKP4 1686 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 PNMA8BQ9ULN7 279 aaPredicted RBP15.85■□□□□ 0.13
CUX1-211ENST00000546411 COL4A1P02462 1669 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 ASGR1P07306 291 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 ABL2P42684 1182 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 CXCR3P49682 368 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 OLFML2BQ68BL8 750 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 DENND1CQ8IV53 801 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 OR6K2Q8NGY2 324 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 NPAS2Q99743 824 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 GATA5Q9BWX5 397 aaPredicted RBP15.85■□□□□ 0.13
CUX1-211ENST00000546411 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
CUX1-211ENST00000546411 CROTQ9UKG9 612 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 SNX5Q9Y5X3 404 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 FGFR1P11362 822 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 NAB1Q13506 487 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 SEMA5AQ13591 1074 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 NOMO2Q5JPE7 1267 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 SPRYD7Q5W111 196 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 FNDC5Q8NAU1 212 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 ZYG11BQ9C0D3 744 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 RHOJQ9H4E5 214 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 FZD10Q9ULW2 581 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 A0A1B0GUL6 1792 aa15.85■□□□□ 0.13
CUX1-211ENST00000546411 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TTC24A2A3L6 582 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 SYNDIG1LA6NDD5 238 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 NEMP2A6NFY4 417 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 DPYSL4O14531 572 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TLR5O60602 858 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 LTA4HP09960 611 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 PSMA4P25789 261 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 RIPK1Q13546 671 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 KRT33BQ14525 404 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 ANKS6Q68DC2 871 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 PPP2R3CQ969Q6 453 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 UBA2Q9UBT2 640 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 PSAT1Q9Y617 370 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 FGF10O15520 208 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 ITM2AO43736 263 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 CCNT2O60583 730 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 ATP5F1P24539 256 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 PBX3P40426 434 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TAF10Q12962 218 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 PLD1Q13393 1074 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 KCNJ11Q14654 390 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TCEAL1Q15170 157 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TBCELQ5QJ74 424 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 ARHGAP17Q68EM7 881 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TPGS1Q6ZTW0 290 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 OSTM1Q86WC4 334 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 SLC22A9Q8IVM8 553 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 METTL6Q8TCB7 284 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 LENG8Q96PV6 779 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 PRPF18Q99633 342 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 GIT1Q9Y2X7 761 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 RAP2CQ9Y3L5 183 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 TBX18O95935 607 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 NELFEP18615 380 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 RPL9P32969 192 aaKnown RBP15.84■□□□□ 0.13
CUX1-211ENST00000546411 IRF9Q00978 393 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 GTF2H3Q13889 308 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 PTPRNQ16849 979 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 LIPMQ5VYY2 423 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 DPY19L2P1Q6NXN4 242 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 CDHR3Q6ZTQ4 885 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 SEPT8Q92599 483 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 THAP11Q96EK4 314 aa15.84■□□□□ 0.13
CUX1-211ENST00000546411 MLNP12872 115 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 MAP4P27816 1152 aaKnown RBP15.83■□□□□ 0.13
CUX1-211ENST00000546411 DSC2Q02487 901 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 KLF10Q13118 480 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.136e-6■■■■■ 34.5
CUX1-211ENST00000546411 ATP6AP1LQ52LC2 224 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 FAM162AQ96A26 154 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 SH3KBP1Q96B97 665 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 MIEF2Q96C03 454 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 HIC2Q96JB3 615 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 ADGRE3Q9BY15 652 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 PAPOLBQ9NRJ5 636 aaKnown RBP15.83■□□□□ 0.13
CUX1-211ENST00000546411 GMIPQ9P107 970 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 KANSL3Q9P2N6 904 aa15.83■□□□□ 0.13
CUX1-211ENST00000546411 PARNO95453 639 aaKnown RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 CHRNGP07510 517 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 PIK3R1P27986 724 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 LRPAP1P30533 357 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 FAM156AQ8NDB6 213 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 PLK2Q9NYY3 685 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 KIF17Q9P2E2 1029 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 SYNCRIPO60506 623 aaKnown RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 ACSBG2Q5FVE4 666 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 PKN3Q6P5Z2 889 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 MOCOSQ96EN8 888 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 C7orf26Q96N11 449 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 TMEM79Q9BSE2 394 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 TXLNGYQ9BZA5 131 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 CDH19Q9H159 772 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms