RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FOXD2O60548 495 aaPredicted RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 BMP2P12643 396 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 PTPN3P26045 913 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CSRP3P50461 194 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CCR3P51677 355 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 NME5P56597 212 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 PFKPQ01813 784 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 SPIDRQ14159 915 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 ZNF829Q3KNS6 432 aaPredicted RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 MAP7D1Q3KQU3 841 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 C6orf10Q5SRN2 563 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 EFCAB12Q6NXP0 572 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 FASTKD5Q7L8L6 764 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 ZC3HC1Q86WB0 502 aaKnown RBP14.37□□□□□ -0.11
SRP54-202ENST00000546080 SLC41A1Q8IVJ1 513 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 ADAMTS16Q8TE57 1224 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 RHOJQ9H4E5 214 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 LRRC4Q9HBW1 653 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 CROTQ9UKG9 612 aa14.37□□□□□ -0.11
SRP54-202ENST00000546080 TARM1B6A8C7 271 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 MRASO14807 208 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ATE1O95260 518 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 OCM2P0CE71 109 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 OCMP0CE72 109 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 COL6A2P12110 1019 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 HDCP19113 662 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 MYF6P23409 242 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 PSMD7P51665 324 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 C21orf59P57076 290 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 IRAK1BP1Q5VVH5 260 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 GRAMD4Q6IC98 578 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 NCCRP1Q6ZVX7 275 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 TP53INP2Q8IXH6 220 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 CENPLQ8N0S6 344 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 PACRGLQ8N7B6 248 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 DDHD1Q8NEL9 900 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 OR2T34Q8NGX1 318 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ZNF420Q8TAQ5 688 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 APOL2Q9BQE5 337 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 NPLQ9BXD5 320 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 MAF1Q9H063 256 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 RPF2Q9H7B2 306 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 TMPRSS4Q9NRS4 437 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 SLC38A7Q9NVC3 462 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ACOT9Q9Y305 439 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 COL4A5P29400 1685 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 GOLGB1Q14789 3259 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 SYNJ2BP-COX16A0A087WUM0 186 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 H3BMQ9 156 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 UBDO15205 165 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 CLASP2O75122 1294 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 SEC24DO94855 1032 aaPredicted RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 SNRPB2P08579 225 aaKnown RBP14.36□□□□□ -0.11
SRP54-202ENST00000546080 GNAO1P09471 354 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 IDO1P14902 403 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ZNF12P17014 697 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 NMBRP28336 390 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ADORA2BP29275 332 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 SCNN1AP37088 669 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 GRIA3P42263 894 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 NPY2RP49146 381 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 RELAQ04206 551 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 AFAP1L2Q8N4X5 818 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 MFSD2AQ8NA29 543 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 TERB1Q8NA31 727 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 COG8Q96MW5 612 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 OMDQ99983 421 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 LPIN3Q9BQK8 851 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 ARMC1Q9NVT9 282 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 COX16Q9P0S2 106 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 TMEM181Q9P2C4 612 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
SRP54-202ENST00000546080 CCDC78A2IDD5 438 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 TMX2-CTNND1H3BSU7 103 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 CYP2C9P11712 490 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 TPH1P17752 444 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 LRPAP1P30533 357 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 TTKP33981 857 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 BCAT1P54687 386 aa14.35□□□□□ -0.11
SRP54-202ENST00000546080 ZNF460Q14592 562 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms