RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ACOT9Q9Y305 439 aa15.24■□□□□ 0.03
USP28-214ENST00000545540 B3GAT3O94766 335 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 YWHAQP27348 245 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 ARNTP27540 789 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 LIPMQ5VYY2 423 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 LRRC8EQ6NSJ5 796 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 ACAD11Q709F0 780 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 TLK2Q86UE8 772 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
USP28-214ENST00000545540 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 CDH17Q12864 832 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 STXBP5Q5T5C0 1151 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 AAGABQ6PD74 315 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 SLC2A13Q96QE2 648 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 RTKNQ9BST9 563 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 TRPC7Q9HCX4 862 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 CDYLQ9Y232 598 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 FNDC3AQ9Y2H6 1198 aaKnown RBP15.23■□□□□ 0.03
USP28-214ENST00000545540 RAP2CQ9Y3L5 183 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 KCTD3Q9Y597 815 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 THRAP10827 490 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 B3GALT6Q96L58 329 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 FSD1LQ9BXM9 530 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 RBM22Q9NW64 420 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP28-214ENST00000545540 CRYL1Q9Y2S2 319 aa15.23■□□□□ 0.03
USP28-214ENST00000545540 A0A0G2JMZ2 1700 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 LRRC14BA6NHZ5 514 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ZNF487B1APH4 448 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 TIMM44O43615 452 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 MPOP05164 745 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ITGB1P05556 798 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ALOX15P16050 662 aaPredicted RBP15.22■□□□□ 0.03
USP28-214ENST00000545540 ETFBP38117 255 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 GSTA3Q16772 222 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 IL23RQ5VWK5 629 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 MYLPFQ96A32 169 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 EPAS1Q99814 870 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 SLC39A8Q9C0K1 460 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 DRC3Q9H069 523 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 OSBPL2Q9H1P3 480 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 DERAQ9Y315 318 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 TPST1O60507 370 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 RNASEH2AO75792 299 aaKnown RBP15.22■□□□□ 0.03
USP28-214ENST00000545540 DDHD2O94830 711 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 CRTAMO95727 393 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
USP28-214ENST00000545540 C1QTNF8P60827 252 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 YBX1P67809 324 aaKnown RBP15.22■□□□□ 0.03
USP28-214ENST00000545540 SEMA3BQ13214 749 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ARL13BQ3SXY8 428 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ZYG11AQ6WRX3 759 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 TRIM67Q6ZTA4 783 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 PDZD4Q76G19 769 aaPredicted RBP15.22■□□□□ 0.03
USP28-214ENST00000545540 PIM3Q86V86 326 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 LRRTM3Q86VH5 581 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 ABHD16BQ9H3Z7 469 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 AP4B1Q9Y6B7 739 aa15.22■□□□□ 0.03
USP28-214ENST00000545540 STMN1P16949 149 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 ZNF423Q2M1K9 1284 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 C14orf80Q86SX3 495 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 SREK1Q8WXA9 508 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 LRCH3Q96II8 777 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 GPR22Q99680 433 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 OLFM1Q99784 485 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 RCOR3Q9P2K3 495 aaPredicted RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 STK39Q9UEW8 545 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 E7ENX8 843 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 PPARGP37231 505 aaPredicted RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 MAGEA12P43365 314 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 KCNC1P48547 511 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 CHN2P52757 468 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 PDAP1Q13442 181 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 RBBP5Q15291 538 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 AGKQ53H12 422 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 UGT2A3Q6UWM9 527 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 RBM44Q6ZP01 1051 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 ATPAF2Q8N5M1 289 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 DQX1Q8TE96 717 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.03
USP28-214ENST00000545540 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 OTOFQ9HC10 1997 aa15.21■□□□□ 0.03
USP28-214ENST00000545540 HLA-DQB2P05538 268 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.02
USP28-214ENST00000545540 SLC12A2P55011 1212 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 ANKRD49Q8WVL7 239 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 TBL1YQ9BQ87 522 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 UBE2OQ9C0C9 1292 aaKnown RBP15.21■□□□□ 0.02
USP28-214ENST00000545540 RHOJQ9H4E5 214 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 COL1A2P08123 1366 aa15.21■□□□□ 0.02
USP28-214ENST00000545540 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 PNPLA4P41247 253 aa15.2■□□□□ 0.02
USP28-214ENST00000545540 CDK18Q07002 472 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms