RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PPP1R9BQ96SB3 815 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 YIPF2Q9BWQ6 316 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 NUSAP1Q9BXS6 441 aaKnown RBP7.9□□□□□ -1.14
SNHG1-223ENST00000545440 RSPH9Q9H1X1 276 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-223ENST00000545440 NLRC4Q9NPP4 1024 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 PRSS16Q9NQE7 514 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 PIGVQ9NUD9 493 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 TMEM74BQ9NUR3 256 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 ARHGEF38Q9NXL2 777 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 WSB2Q9NYS7 404 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-223ENST00000545440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.9□□□□□ -1.14
SNHG1-223ENST00000545440 COX16Q9P0S2 106 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 SUSD2Q9UGT4 822 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 SUN2Q9UH99 717 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 INTS6Q9UL03 887 aaKnown RBP7.9□□□□□ -1.14
SNHG1-223ENST00000545440 AP4E1Q9UPM8 1137 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 EFR3BQ9Y2G0 817 aa7.9□□□□□ -1.14
SNHG1-223ENST00000545440 TPRP12270 2363 aaKnown RBP7.9□□□□□ -1.15
SNHG1-223ENST00000545440 TDRD6O60522 2096 aaKnown RBP7.9□□□□□ -1.15
SNHG1-223ENST00000545440 COL5A1P20908 1838 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 EDDM13A0A1B0GTR0 161 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 MEI4A8MW99 385 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 CFIP05156 583 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ADRB1P08588 477 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 SERPINF2P08697 491 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 GNSP15586 552 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 HOXB4P17483 251 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ATF4P18848 351 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 CDK11BP21127 795 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 MMP8P22894 467 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 RDXP35241 583 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 FLT3P36888 993 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 PLK1P53350 603 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 RPS14P62263 151 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 IRX4P78413 519 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ECT2LQ008S8 904 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 UBXN1Q04323 297 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 AUHQ13825 339 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ANO6Q4KMQ2 910 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 WDR45BQ5MNZ6 344 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 WIPI1Q5MNZ9 446 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 SYCP2LQ5T4T6 812 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 DAB2IPQ5VWQ8 1189 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 RNF219Q5W0B1 726 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF776Q68DI1 518 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 CXorf57Q6NSI4 855 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 FBXL22Q6P050 247 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 MMS22LQ6ZRQ5 1243 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 USP30Q70CQ3 517 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 BNIPLQ7Z465 357 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 AOPEPQ8N6M6 819 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF366Q8N895 744 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 CPA5Q8WXQ8 436 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 DNASE2BQ8WZ79 361 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 RPRD1AQ96P16 312 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 TBCBQ99426 244 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 NUP58Q9BVL2 599 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 TKTL2Q9H0I9 626 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 WDCPQ9H6R7 721 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 SSU72Q9NP77 194 aaKnown RBP7.89□□□□□ -1.15
SNHG1-223ENST00000545440 TMEM59LQ9UK28 342 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 VANGL2Q9ULK5 521 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 SCML1Q9UN30 329 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 ERVW-1Q9UQF0 538 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 HS3ST4Q9Y661 456 aa7.89□□□□□ -1.15
SNHG1-223ENST00000545440 TARSL2A2RTX5 802 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 C4orf47A7E2U8 309 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 GOLGA8SH3BPF8 625 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 I6L893 689 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CDX4O14627 284 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 RNASEH1O60930 286 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ADAM11O75078 769 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CLDN11O75508 207 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 DNTTP04053 509 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 UNGP13051 313 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ATP1A3P13637 1013 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 PDGFRAP16234 1089 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CHRNB2P17787 502 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ENGP17813 658 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 NSFP46459 744 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 IRAK1P51617 712 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CDH4P55283 916 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 RNASE9P60153 205 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 DEUP1Q05D60 604 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 GFPT1Q06210 699 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ELAVL3Q14576 367 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 C2CD6Q53TS8 623 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 TRNP1Q6NT89 227 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CAVIN1Q6NZI2 390 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 REC114Q7Z4M0 266 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 CIR1Q86X95 450 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 PHF13Q86YI8 300 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 SLITRK4Q8IW52 837 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 DHX40Q8IX18 779 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF683Q8IZ20 524 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 APCDD1Q8J025 514 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 DEFB119Q8N690 84 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 IGSF8Q969P0 613 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms