RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FNIP1Q8TF40 1166 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 OR8D1Q8WZ84 308 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 PTPRN2Q92932 1015 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC114Q96M63 670 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 HSPA12BQ96MM6 686 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RTKNQ9BST9 563 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GPR174Q9BXC1 333 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RAB6CQ9H0N0 254 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 PCED1AQ9H1Q7 454 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 RSPH9Q9H1X1 276 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 MTG2Q9H4K7 406 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SUV39H2Q9H5I1 410 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 C12orf49Q9H741 205 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CATSPERBQ9H7T0 1116 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SGK2Q9HBY8 427 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 CD93Q9NPY3 652 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 TMEM248Q9NWD8 314 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 FBXL12Q9NXK8 326 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 MYO1AQ9UBC5 1043 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 SUSD2Q9UGT4 822 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-224ENST00000544990 PILRBQ9UKJ0 227 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 FZD10Q9ULW2 581 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 OR51B4Q9Y5P0 310 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 USP34Q70CQ2 3546 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 GPR179Q6PRD1 2367 aa7.54□□□□□ -1.2
CPSF7-224ENST00000544990 DMDP11532 3685 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 A0A0D9SEW6 157 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CXorf51AA0A1B0GTR3 108 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 METTL12A8MUP2 240 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 C1QTNF3-AMACRE9PGA6 284 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FAM72CH0Y354 149 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CBX4O00257 560 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 ALOX15BO15296 676 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CREB3O43889 395 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 PRPSAP2O60256 369 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 LRIG2O94898 1065 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 RECKO95980 971 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 GHRHP01286 108 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 IL1BP01584 269 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 C5AR1P21730 350 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 EPHB2P29323 1055 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 HNRNPH3P31942 346 aaKnown RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 HTR7P34969 479 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 RECQLP46063 649 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 LIMK1P53667 647 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 GEMIN4P57678 1058 aaKnown RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC15Q0P6D6 951 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC122Q5T0U0 273 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 ERMARDQ5T6L9 678 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FAM72AQ5TYM5 149 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 MANEALQ5VSG8 457 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FAM72DQ6L9T8 149 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 ALKBH5Q6P6C2 394 aaKnown RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 SLC23A3Q6PIS1 610 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FAM72BQ86X60 149 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 DNAAF5Q86Y56 855 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 SLC41A1Q8IVJ1 513 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 VSTM4Q8IW00 320 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 STK40Q8N2I9 435 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 OR7D4Q8NG98 312 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FRS2Q8WU20 508 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 RMDN1Q96DB5 314 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 PSMB7Q99436 277 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 OMDQ99983 421 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 TRIM5Q9C035 493 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 MAGEH1Q9H213 219 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 PABPC3Q9H361 631 aaKnown RBP7.53□□□□□ -1.2
CPSF7-224ENST00000544990 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 SMOC1Q9H4F8 434 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 ATP13A1Q9HD20 1204 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 TMEM74BQ9NUR3 256 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 DLL3Q9NYJ7 618 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 FAM8A1Q9UBU6 413 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 VPS51Q9UID3 782 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 SLC6A14Q9UN76 642 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 HS3ST2Q9Y278 367 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 GON4LQ3T8J9 2241 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 GVINP1Q7Z2Y8 2422 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 VPS13AQ96RL7 3174 aa7.53□□□□□ -1.2
CPSF7-224ENST00000544990 CHD5Q8TDI0 1954 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 A0A087X0T9 212 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 A0A1W2PP55 124 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ZSCAN5CA6NGD5 496 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 LRRC72A6NJI9 287 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PATE3B3GLJ2 98 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SLC30A4O14863 429 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MCF2LO15068 1137 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MID1O15344 667 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 FGF10O15520 208 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DAPK3O43293 454 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms