RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 IL9RQ01113 521 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
ACTN1-206ENST00000544964 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-206ENST00000544964 RABGAP1LQ5R372 815 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 CXorf57Q6NSI4 855 aaKnown RBP12.74□□□□□ -0.37
ACTN1-206ENST00000544964 LRRC31Q6UY01 552 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 ZNF662Q6ZS27 426 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 REXO1L1PQ8IX06 675 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 STK40Q8N2I9 435 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 OR2T34Q8NGX1 318 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 MDM1Q8TC05 714 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 PTPRN2Q92932 1015 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 FAM131CQ96AQ9 280 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 RPL10LQ96L21 214 aaKnown RBP12.74□□□□□ -0.37
ACTN1-206ENST00000544964 MPP6Q9NZW5 540 aa12.74□□□□□ -0.37
ACTN1-206ENST00000544964 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 DOCK4Q8N1I0 1966 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 A0A1W2PR77 199 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 TARSL2A2RTX5 802 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 DRGXA6NNA5 263 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 USP27XA6NNY8 438 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 WNT9AO14904 365 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ZSCAN12O43309 604 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 RNASEH1O60930 286 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 LRIG2O94898 1065 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 MZF1P28698 734 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 L1CAMP32004 1257 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 SLC8A1P32418 973 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 DRD3P35462 400 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 PPP2CBP62714 309 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 PPP2CAP67775 309 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 SHBQ15464 509 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ALFQ53S48 1182 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 MANEALQ5VSG8 457 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 RNF10Q8N5U6 811 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 LRRC57Q8N9N7 239 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 OR52K2Q8NGK3 314 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 KIAA1524Q8TCG1 905 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 GANCQ8TET4 914 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 FRS2Q8WU20 508 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ACE2Q9BYF1 805 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.73□□□□□ -0.37
ACTN1-206ENST00000544964 NCKAP1Q9Y2A7 1128 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 ASXL3Q9C0F0 2248 aa12.73□□□□□ -0.37
ACTN1-206ENST00000544964 MYLKQ15746 1914 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 A0A1B0GVM2 712 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 TCAF2A6NFQ2 919 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 TNFSF14O43557 240 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 RNASEH2AO75792 299 aaKnown RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 FTCDO95954 541 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ADH1BP00325 375 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 KRT7P08729 469 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 CD48P09326 243 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 GOT1P17174 413 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 MARCKSL1P49006 195 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 CDH6P55285 790 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 NRG1Q02297 640 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 KRT81Q14533 505 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 C5orf22Q49AR2 442 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ACBD5Q5T8D3 534 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 TFAP2DQ7Z6R9 452 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ADAT2Q7Z6V5 191 aaKnown RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 PSTKQ8IV42 348 aaKnown RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ALG14Q96F25 216 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ELF4Q99607 663 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 EPAS1Q99814 870 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 CCDC86Q9H6F5 360 aaKnown RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 DKK4Q9UBT3 224 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 PACSIN2Q9UNF0 486 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-206ENST00000544964 NEU3Q9UQ49 428 aa12.72□□□□□ -0.37
ACTN1-206ENST00000544964 LRRC72A6NJI9 287 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 CBX4O00257 560 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
ACTN1-206ENST00000544964 PLK4O00444 970 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 LATO43561 262 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 KRT1P04264 644 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 C5AR1P21730 350 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 EPHB2P29323 1055 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 CCR5P51681 352 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 ARSEP51690 589 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 PLK1P53350 603 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 CDH4P55283 916 aa12.71□□□□□ -0.37
ACTN1-206ENST00000544964 C21orf59P57076 290 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms