RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 RGRP47804 291 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 FNTAP49354 379 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 GDF10P55107 478 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 RHOAP61586 193 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 SNRPD1P62314 119 aaKnown RBP13.28□□□□□ -0.28
DDX11-227ENST00000544652 CKAP4Q07065 602 aaKnown RBP13.28□□□□□ -0.28
DDX11-227ENST00000544652 SNX1Q13596 522 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ZNF235Q14590 738 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ACCSLQ4AC99 568 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 CARD16Q5EG05 197 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 RALGPS1Q5JS13 557 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
DDX11-227ENST00000544652 Q6ZVU0 165 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ZNF567Q8N184 647 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ZNF366Q8N895 744 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 SPATA4Q8NEY3 305 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 SLCO2A1Q92959 643 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 MTG2Q9H4K7 406 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 EPHX3Q9H6B9 360 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 PCYOX1Q9UHG3 505 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 TRHDEQ9UKU6 1024 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ZNF148Q9UQR1 794 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ZNF106Q9H2Y7 1883 aaKnown RBP13.27□□□□□ -0.28
DDX11-227ENST00000544652 DOCK9Q9BZ29 2069 aa13.27□□□□□ -0.28
DDX11-227ENST00000544652 ZBTB24O43167 697 aaPredicted RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 GCATO75600 419 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 IGSF6O95976 241 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 DCNP07585 359 aaKnown RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 COL9A1P20849 921 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 CES1P23141 567 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 CD68P34810 354 aaPredicted RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 WASP42768 502 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 KCNJ1P48048 391 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 LMNB2Q03252 620 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 ELAVL3Q14576 367 aaKnown RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 CRY1Q16526 586 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 P3H1Q32P28 736 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 ANKRD20A2Q5SQ80 823 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 ANKRD20A1Q5TYW2 823 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 DPY19L3Q6ZPD9 716 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 ARRDC2Q8TBH0 407 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 CCDC114Q96M63 670 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 GDAP1L1Q96MZ0 367 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 SPATA13Q96N96 652 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 NUDCD1Q96RS6 583 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 FAM129BQ96TA1 746 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 CEP41Q9BYV8 373 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 CPEB1Q9BZB8 566 aaKnown RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 TM6SF2Q9BZW4 377 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 DDX47Q9H0S4 455 aaKnown RBP13.27□□□□□ -0.29
DDX11-227ENST00000544652 TNKS2Q9H2K2 1166 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 FBRSQ9HAH7 460 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 NT5MQ9NPB1 228 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
DDX11-227ENST00000544652 OPHN1O60890 802 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 PAPSS2O95340 614 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 POP4O95707 220 aaKnown RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 VCANP13611 3396 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 CCNHP51946 323 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 COPAP53621 1224 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 NRLP54845 237 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 MAXP61244 160 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 SLC14A2Q15849 920 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 PID1Q7Z2X4 250 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 SRLQ86TD4 932 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 KLHDC8BQ8IXV7 354 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 OR2T3Q8NH03 318 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 PBXIP1Q96AQ6 731 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 TADA1Q96BN2 335 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 EXOC2Q96KP1 924 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 NSMCE3Q96MG7 304 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 RUNDC3BQ96NL0 473 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 AGAP3Q96P47 875 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 FCRL5Q96RD9 977 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 RSPH9Q9H1X1 276 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 GLOD4Q9HC38 313 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 C11orf16Q9NQ32 467 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 C2orf42Q9NWW7 574 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 SEPT10Q9P0V9 454 aa13.26□□□□□ -0.29
DDX11-227ENST00000544652 KLHL8Q9P2G9 620 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 HECAQ9UBI9 543 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 TNRC6BQ9UPQ9 1833 aaKnown RBP13.26□□□□□ -0.29
DDX11-227ENST00000544652 CACNA1IQ9P0X4 2223 aa13.25□□□□□ -0.29
DDX11-227ENST00000544652 INSIG1O15503 277 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms