RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 DNASE2BQ8WZ79 361 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 MAML1Q92585 1016 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 FOXJ1Q92949 421 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 ARRDC3Q96B67 414 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 OLFM3Q96PB7 478 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 OMDQ99983 421 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 HDAC8Q9BY41 377 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 CPEB1Q9BZB8 566 aaKnown RBP19.41■□□□□ 0.7
DDX55-211ENST00000544429 GMEB2Q9UKD1 530 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 PILRBQ9UKJ0 227 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 NCKAP1Q9Y2A7 1128 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDX55-211ENST00000544429 CACNA1EQ15878 2313 aa19.41■□□□□ 0.7
DDX55-211ENST00000544429 DOCK9Q9BZ29 2069 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 CCDC66A2RUB6 948 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 NDUFS2O75306 463 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 ZRANB2O95218 330 aaKnown RBP eCLIP19.4■□□□□ 0.7
DDX55-211ENST00000544429 IGSF6O95976 241 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 CCDC175P0C221 793 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 TNNT1P13805 278 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 ITGB7P26010 798 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 GKP32189 559 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 DNA2P51530 1060 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 NAP1L1P55209 391 aaKnown RBP19.4■□□□□ 0.7
DDX55-211ENST00000544429 TAS2R38P59533 333 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 ADCY2Q08462 1091 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 PPP2R5EQ16537 467 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 TFDP3Q5H9I0 405 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 LYSMD4Q5XG99 296 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 OR6K2Q8NGY2 324 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 ALG3Q92685 438 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 HDAC11Q96DB2 347 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 HSPA12BQ96MM6 686 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 OSBPL1AQ9BXW6 950 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 ARRDC1-AS1Q9H2J1 176 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 KDM4CQ9H3R0 1056 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 C6orf106Q9H6K1 298 aaPredicted RBP19.4■□□□□ 0.7
DDX55-211ENST00000544429 PARD6AQ9NPB6 346 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 NCDNQ9UBB6 729 aa19.4■□□□□ 0.7
DDX55-211ENST00000544429 hCG_1818297A0A087WSY0 165 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 PLK4O00444 970 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 KPNA3O00505 521 aaPredicted RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 KRT86O43790 486 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 ZFXP17010 805 aaPredicted RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 CR2P20023 1033 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 MX2P20592 715 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 ITPKAP23677 461 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 CCNCP24863 283 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 PTPN7P35236 360 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 HOXD12P35452 270 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 MPLP40238 635 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 DHPSP49366 369 aaPredicted RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 COPS2P61201 443 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 HNRNPDQ14103 355 aaKnown RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 GSE1Q14687 1217 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 LBRQ14739 615 aaKnown RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 SYCE1Q8N0S2 351 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 PGBD5Q8N414 524 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 DEFB119Q8N690 84 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 OR2T34Q8NGX1 318 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 C1orf216Q8TAB5 229 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 RBM41Q96IZ5 413 aaKnown RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 EXOC2Q96KP1 924 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 NSMCE3Q96MG7 304 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 MGME1Q9BQP7 344 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 ORAI3Q9BRQ5 295 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 KCNF1Q9H3M0 494 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 ZDHHC6Q9H6R6 413 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 TMEM74BQ9NUR3 256 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 SEPT3Q9UH03 358 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 EVLQ9UI08 416 aaPredicted RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 EFR3BQ9Y2G0 817 aa19.39■□□□□ 0.69
DDX55-211ENST00000544429 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.39■□□□□ 0.69
DDX55-211ENST00000544429 KRIT1O00522 736 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 APOL1O14791 398 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 INSIG1O15503 277 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 MAP3K6O95382 1288 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 IGHV4-34P06331 123 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 KRT10P13645 584 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 PPIDQ08752 370 aaKnown RBP19.38■□□□□ 0.69
DDX55-211ENST00000544429 TFDP2Q14188 446 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 POM121L1PQ3SYA9 428 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 ZNF805Q5CZA5 627 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 NCEH1Q6PIU2 408 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.38■□□□□ 0.69
DDX55-211ENST00000544429 ERN2Q76MJ5 926 aaKnown RBP19.38■□□□□ 0.69
DDX55-211ENST00000544429 SYT12Q8IV01 421 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 UBE2Q2Q8WVN8 375 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 BIRC7Q96CA5 298 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 HES6Q96HZ4 224 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 PPP1R16AQ96I34 528 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 DMXL1Q9Y485 3027 aa19.38■□□□□ 0.69
DDX55-211ENST00000544429 PCDH15Q96QU1 1955 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 PLXNA2O75051 1894 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 TSPAN11A1L157 253 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 MIF4GDA9UHW6 222 aaKnown RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 MATN3O15232 486 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 DDX3YO15523 660 aaKnown RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 LATO43561 262 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms