RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	CES4A	Q5XG92	561 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	C16orf46	Q6P387	395 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	LCA5	Q86VQ0	697 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	LONP2	Q86WA8	852 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	GJD3	Q8N144	294 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	KLHL23	Q8NBE8	558 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	PPHLN1	Q8NEY8	458 aa	Known RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	CFAP61	Q8NHU2	1237 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	SPPL3	Q8TCT6	385 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	USP33	Q8TEY7	942 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	TBC1D10A	Q9BXI6	508 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	IGFLR1	Q9H665	355 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	ENTPD7	Q9NQZ7	604 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	ARL8B	Q9NVJ2	186 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	ABI2	Q9NYB9	513 aa	Predicted RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	SORCS3	Q9UPU3	1222 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	STK38L	Q9Y2H1	464 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	HS3ST4	Q9Y661	456 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	ANKRD36	A6QL64	1941 aa		11.42	□□□□□ -0.58
LDHA-222	ENST00000543695	MSI1	O43347	362 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	HOXA2	O43364	376 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CSPG5	O95196	566 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	EZR	P15311	586 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	COL9A1	P20849	921 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	NMBR	P28336	390 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	ADRA1A	P35348	466 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	SLC1A6	P48664	564 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	PSEN1	P49768	467 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	GATM	P50440	423 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CSRP3	P50461	194 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TUB	P50607	506 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	PRKAA2	P54646	552 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TBX4	P57082	545 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	RPL10A	P62906	217 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	HYAL1	Q12794	435 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	SMARCB1	Q12824	385 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	MTA1	Q13330	715 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CAMK1	Q14012	370 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TRIP4	Q15650	581 aa	Predicted RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	UGP2	Q16851	508 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	VARS2	Q5ST30	1063 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	ZNF280D	Q6N043	979 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	PKN3	Q6P5Z2	889 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	ARHGAP36	Q6ZRI8	547 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	OTOP3	Q7RTS5	596 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CLEC14A	Q86T13	490 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	WDR75	Q8IWA0	830 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CNTN4	Q8IWV2	1026 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	ZNF683	Q8IZ20	524 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	UMODL1-AS1	Q8N2C9	162 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	ATP6V0D2	Q8N8Y2	350 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	RDH11	Q8TC12	318 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	MICAL1	Q8TDZ2	1067 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	AGAP11	Q8TF27	550 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	POF1B	Q8WVV4	589 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	SREK1	Q8WXA9	508 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	GPR22	Q99680	433 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	BTBD10	Q9BSF8	475 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	RHOJ	Q9H4E5	214 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	IARS2	Q9NSE4	1012 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TMEM248	Q9NWD8	314 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	DNAJC28	Q9NX36	388 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	CLIC5	Q9NZA1	410 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TMEM216	Q9P0N5	145 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	COPG2	Q9UBF2	871 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	NUMBL	Q9Y6R0	609 aa		11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	TCF20	Q9UGU0	1960 aa	Known RBP	11.41	□□□□□ -0.58
LDHA-222	ENST00000543695	IGLV3-10	A0A075B6K4	115 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695		A0A096LPK6	155 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695		A8MUI8	341 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	TMEM114	B3SHH9	223 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	SIN3B	O75182	1162 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	TADA2A	O75478	443 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	TOP3B	O95985	862 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	HLA-DQB2	P05538	268 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	MYL4	P12829	197 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	CPA3	P15088	417 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	IL9	P15248	144 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	ALOX15	P16050	662 aa	Predicted RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	LTBR	P36941	435 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	HARS2	P49590	506 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	PGF	P49763	221 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	PAPOLA	P51003	745 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	UBE3A	Q05086	875 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	TNK2	Q07912	1038 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	HSF5	Q4G112	596 aa	Predicted RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	CTXN3	Q4LDR2	81 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	HSP90AA5P	Q58FG0	334 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	PIK3R6	Q5UE93	754 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	FSTL4	Q6MZW2	842 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	C14orf80	Q86SX3	495 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	ABI1	Q8IZP0	508 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	OR6Y1	Q8NGX8	325 aa		11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	PIWIL2	Q8TC59	973 aa	Known RBP	11.4	□□□□□ -0.58
LDHA-222	ENST00000543695	PPP4R1	Q8TF05	950 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms