RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PBKQ96KB5 322 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MRGPRX1Q96LB2 322 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 NAP1L3Q99457 506 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 NAPGQ99747 312 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 TLR10Q9BXR5 811 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 OSBPL1AQ9BXW6 950 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CEP41Q9BYV8 373 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 POLR1EQ9GZS1 481 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 MKRN2Q9H000 416 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 BRD8Q9H0E9 1235 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 RSPH9Q9H1X1 276 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 ATP13A3Q9H7F0 1226 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PDFQ9HBH1 243 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ZSCAN32Q9NX65 697 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 FBXL12Q9NXK8 326 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 KLHL8Q9P2G9 620 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 LHX3Q9UBR4 397 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 EBF1Q9UH73 591 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 RAB23Q9ULC3 237 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SCML1Q9UN30 329 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CKAP5Q14008 2032 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MYO18AQ92614 2054 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 TTC24A2A3L6 582 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 PRR23AA6NEV1 266 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 PGRMC1O00264 195 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 NEMP1O14524 444 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 KCNN4O15554 427 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 MTSS1O43312 755 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 RPP40O75818 363 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZNF189O75820 626 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 PIGNO95427 931 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 RBP3P10745 1247 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 CHRM1P11229 460 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 TCP1P17987 556 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 C5AR1P21730 350 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 CA4P22748 312 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 RBL1P28749 1068 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SERPINA4P29622 427 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 OXTRP30559 389 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 GKP32189 559 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ACTN2P35609 894 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 MAPK8P45983 427 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 TPMTP51580 245 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZBTB16Q05516 673 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZNF33AQ06730 810 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 XRCC4Q13426 336 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SNX1Q13596 522 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SIM2Q14190 667 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 GRM3Q14832 879 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 NOMO1Q15155 1222 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SLC45A4Q5BKX6 768 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SLC36A4Q6YBV0 504 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 GSTA5Q7RTV2 222 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 PID1Q7Z2X4 250 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 KBTBD6Q86V97 674 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 MAML2Q8IZL2 1156 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 TMIEQ8NEW7 156 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 PRSS33Q8NF86 280 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 OR14C36Q8NHC7 312 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 C1orf54Q8WWF1 131 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 HTR3CQ8WXA8 447 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SNX19Q92543 992 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZNF592Q92610 1267 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 CAPZA3Q96KX2 299 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 C16orf45Q96MC5 204 aaPredicted RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 KLHL32Q96NJ5 620 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 AGAP3Q96P47 875 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 TSGA13Q96PP4 275 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 QKIQ96PU8 341 aaKnown RBP eCLIP6.4□□□□□ -1.38
LTBR-212ENST00000543542 PSKH2Q96QS6 385 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 OSBPL9Q96SU4 736 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 FAM129BQ96TA1 746 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SEMA3CQ99985 751 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 HERPUD2Q9BSE4 406 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 BTBD1Q9H0C5 482 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 KCNH6Q9H252 994 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
LTBR-212ENST00000543542 C10orf88Q9H8K7 445 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ITM2CQ9NQX7 267 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 SNX12Q9UMY4 172 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZNF148Q9UQR1 794 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ZKSCAN5Q9Y2L8 839 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 PCDHGA2Q9Y5H1 932 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 R4GN57 208 aa6.4□□□□□ -1.38
LTBR-212ENST00000543542 ANKRD36A6QL64 1941 aa6.4□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3DA0A087WVF3 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3IA0A087WXS9 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3EA0A087X179 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3KA0A087X1G2 549 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 CCDC163A0A0D9SF12 145 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 GOLGA6L10A0A0M3HER8 536 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TCRBV7S2A1N4TA0A589 114 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3FA6NER0 549 aaPredicted RBP6.39□□□□□ -1.39
LTBR-212ENST00000543542 LRRC72A6NJI9 287 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 MEI4A8MW99 385 aa6.39□□□□□ -1.39
LTBR-212ENST00000543542 TBC1D3LB9A6J9 549 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms