RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CITED2Q99967 270 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 C1QTNF3Q9BXJ4 246 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TEX101Q9BY14 249 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 MRPL1Q9BYD6 325 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SEZ6LQ9BYH1 1024 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 IKZF4Q9H2S9 585 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 DEF6Q9H4E7 631 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SNTG1Q9NSN8 517 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ABHD10Q9NUJ1 306 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TRPM5Q9NZQ8 1165 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 MGAT4CQ9UBM8 478 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 NENFQ9UMX5 172 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PPIEQ9UNP9 301 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 KNSTRNQ9Y448 316 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CHST2Q9Y4C5 530 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 FPGT-TNNI3KV9GXZ4 949 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CAMSAP1Q5T5Y3 1602 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SIGLEC1Q9BZZ2 1709 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ATP10AO60312 1499 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PLA2R1Q13018 1463 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 CPS1P31327 1500 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 HECW1Q76N89 1606 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 A0A1W2PRG0 241 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 OR2A25A4D2G3 310 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PRAMEF2O60811 474 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 IL6RP08887 468 aaPredicted RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 C6P13671 934 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 STMN1P16949 149 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 DUSP1P28562 367 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 KRT2P35908 639 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 CLK3P49761 638 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PMS2P54278 862 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 OAZ1P54368 228 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 TPTEP56180 551 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC37A1P57057 533 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PPP2CBP62714 309 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PPP2CAP67775 309 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 E2F1Q01094 437 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 FOXL1Q12952 345 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 BAATQ14032 418 aaPredicted RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SMC1AQ14683 1233 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 E2F5Q15329 346 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PKN2Q16513 984 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF674Q2M3X9 581 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SPDYE7PQ495Y7 208 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 JADE1Q6IE81 842 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 HMBOX1Q6NT76 420 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC30A9Q6PML9 568 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 KYAT3Q6YP21 454 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PTCHD4Q6ZW05 846 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 HTR3DQ70Z44 454 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 GSTA5Q7RTV2 222 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 FAM160B2Q86V87 743 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 RHPN2Q8IUC4 686 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 ADGRF3Q8IZF5 1079 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SIRT6Q8N6T7 355 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SETD9Q8NE22 299 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PSPC1Q8WXF1 523 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 CCDC47Q96A33 483 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 MMABQ96EY8 250 aaPredicted RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 BOD1Q96IK1 185 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 LOXL4Q96JB6 756 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SRSF8Q9BRL6 282 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 TUBB6Q9BUF5 446 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 THUMPD3Q9BV44 507 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 GPR87Q9BY21 358 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 ALOXE3Q9BYJ1 711 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 DNAI2Q9GZS0 605 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 USP29Q9HBJ7 922 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 GALNT9Q9HCQ5 603 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PFDN4Q9NQP4 134 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SNX15Q9NRS6 342 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 DLGAP2Q9P1A6 1054 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 KIAA1456Q9P272 454 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 UPB1Q9UBR1 384 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 SEC63Q9UGP8 760 aaKnown RBP4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 HAO1Q9UJM8 370 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PADI1Q9ULC6 663 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 A4GNTQ9UNA3 340 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 B3GNT3Q9Y2A9 372 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 PKP3Q9Y446 797 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 NOX1Q9Y5S8 564 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 ATP10BO94823 1461 aa4.11□□□□□ -1.75
SFSWAP-211ENST00000542813 TRBC2A0A5B9 178 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 CAPN14A8MX76 684 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 AP4M1O00189 453 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 DSCR3O14972 297 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 SCAMP1O15126 338 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 STRNO43815 780 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MBPP02686 304 aaPredicted RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 MT-ND3P03897 115 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 RHOP08100 348 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 ALDOCP09972 364 aaKnown RBP4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 THEGLP0DJG4 465 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 KRT10P13645 584 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF20P17024 532 aa4.1□□□□□ -1.75
SFSWAP-211ENST00000542813 HOXB9P17482 250 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms