RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 CCDC195A0A1B0GUA6 201 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 AHCYL1O43865 530 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 TBC1D4O60343 1298 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 TADA2AO75478 443 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 TM7SF2O76062 418 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SELPP16109 830 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 YY1P25490 414 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PAPOLAP51003 745 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 RABGGTBP53611 331 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 RAB10P61026 200 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PRKAA1Q13131 559 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 GPR17Q13304 367 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 BFSP2Q13515 415 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 C1QTNF12Q5T7M4 302 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PIK3R6Q5UE93 754 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 EPGNQ6UW88 154 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ALYREFQ86V81 257 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 KLHL23Q8NBE8 558 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 AZIN2Q96A70 460 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 CMTM5Q96DZ9 223 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ZNF778Q96MU6 729 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 RILPQ96NA2 401 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 NUDCD1Q96RS6 583 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 FICDQ9BVA6 458 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 FSD1LQ9BXM9 530 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PPP1R12CQ9BZL4 782 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 C20orf27Q9GZN8 174 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SIK2Q9H0K1 926 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 DENND2DQ9H6A0 471 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 MAGED2Q9UNF1 606 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 PLA2G4CQ9UP65 541 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 A6NHS1 94 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 TARM1B6A8C7 271 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ARVCFO00192 962 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SLC7A4O43246 635 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 USP12O75317 370 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PYGLP06737 847 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 LINGO3P0C6S8 592 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 OR1G1P47890 313 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 CD151P48509 253 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 GALNT1Q10472 559 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 THOC5Q13769 683 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 GRM3Q14832 879 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ARHGEF6Q15052 776 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PAN2Q504Q3 1202 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 MS4A13Q5J8X5 152 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SNX30Q5VWJ9 437 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 AAGABQ6PD74 315 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 RINLQ6ZS11 566 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 OTOP3Q7RTS5 596 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 CTU1Q7Z7A3 348 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 SCN4BQ8IWT1 228 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 PDZD8Q8NEN9 1154 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 FAR2Q96K12 515 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 CNDP1Q96KN2 507 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 AGAP2Q99490 1192 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ACE2Q9BYF1 805 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 ILKAPQ9H0C8 392 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 NOL6Q9H6R4 1146 aaKnown RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 ABI2Q9NYB9 513 aaPredicted RBP9.99□□□□□ -0.81
SS18-205ENST00000542420 LMCD1Q9NZU5 365 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SLC17A6Q9P2U8 582 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 SFMBT1Q9UHJ3 866 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 ACOT9Q9Y305 439 aa9.99□□□□□ -0.81
SS18-205ENST00000542420 CARNS1A5YM72 827 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 A8MUI8 341 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 B2RBV5 119 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 F5H423 210 aaPredicted RBP9.98□□□□□ -0.81
SS18-205ENST00000542420 HGSO14964 777 aaPredicted RBP9.98□□□□□ -0.81
SS18-205ENST00000542420 ITM2AO43736 263 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 CIB2O75838 187 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 HSPA4LO95757 839 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
SS18-205ENST00000542420 STMN1P16949 149 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 PGM1P36871 562 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 PBX3P40426 434 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 LEPRP48357 1165 aaKnown RBP9.98□□□□□ -0.81
SS18-205ENST00000542420 IDH3AP50213 366 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 ACVR1Q04771 509 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 ITGA9Q13797 1035 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 RCN2Q14257 317 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 MBTPS1Q14703 1052 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 HERC3Q15034 1050 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 CTXN3Q4LDR2 81 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 KLHDC10Q6PID8 442 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 CES3Q6UWW8 571 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 LRRC8DQ7L1W4 858 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 CMC1Q7Z7K0 106 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 ADGRG6Q86SQ4 1221 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 ZNF280BQ86YH2 543 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 IPMKQ8NFU5 416 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 HASPINQ8TF76 798 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 MRPL57Q9BQC6 102 aaKnown RBP9.98□□□□□ -0.81
SS18-205ENST00000542420 POPDC3Q9HBV1 291 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 HACD3Q9P035 362 aa9.98□□□□□ -0.81
SS18-205ENST00000542420 ZNF212Q9UDV6 495 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms