RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	ARSE	P51690	589 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	VAV2	P52735	878 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	RAD51	Q06609	339 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	INO80D	Q53TQ3	878 aa	Predicted RBP	19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	ANKRD20A8P	Q5CZ79	823 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	TRIM61	Q5EBN2	209 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	PEAR1	Q5VY43	1037 aa	Predicted RBP	19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	AFMID	Q63HM1	303 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	RHOT1	Q8IXI2	618 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	ATPAF2	Q8N5M1	289 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	RAPGEF5	Q92565	580 aa		19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	CINP	Q9BW66	212 aa	Predicted RBP	19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	EIF2B4	Q9UI10	523 aa	Known RBP	19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	REXO2	Q9Y3B8	237 aa	Known RBP	19.95	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3D	A0A087WVF3	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3I	A0A087WXS9	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3E	A0A087X179	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3K	A0A087X1G2	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3F	A6NER0	549 aa	Predicted RBP	19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3L	B9A6J9	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TM4SF5	O14894	197 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	MFSD11	O43934	449 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	PALM	O75781	387 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3H	P0C7X1	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	C7	P10643	843 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	IL4R	P24394	825 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	HOXD12	P35452	270 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	ADPRH	P54922	357 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	IL10RB	Q08334	325 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	CYTH1	Q15438	398 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	KIAA0895L	Q68EN5	471 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3G	Q6DHY5	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3C	Q6IPX1	549 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	SLC23A3	Q6PIS1	610 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	DAAM2	Q86T65	1068 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TBC1D3	Q8IZP1	549 aa	Predicted RBP	19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	ZCCHC9	Q8N567	271 aa	Known RBP	19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	OR2T34	Q8NGX1	318 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	PCDH19	Q8TAB3	1148 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	FAM71B	Q8TC56	605 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	NUSAP1	Q9BXS6	441 aa	Known RBP	19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	GRPEL1	Q9HAV7	217 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	PDF	Q9HBH1	243 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	ALG6	Q9Y672	507 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	SHROOM3	Q8TF72	1996 aa		19.94	■□□□□ 0.78
ARF3-208	ENST00000541959	C4orf47	A7E2U8	309 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	RNF103	O00237	685 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	MAP3K6	O95382	1288 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	POP4	O95707	220 aa	Known RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	UGT2B4	P06133	528 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	GNS	P15586	552 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	HADHB	P55084	474 aa	Known RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	CCDC15	Q0P6D6	951 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	DUOXA1	Q1HG43	343 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	MYLK3	Q32MK0	819 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	NCBP2-AS2	Q69YL0	99 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	TXLNB	Q8N3L3	684 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	NSMCE1	Q8WV22	266 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	RNF25	Q96BH1	459 aa	Predicted RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	MAK16	Q9BXY0	300 aa	Known RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	PCED1A	Q9H1Q7	454 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	DDX56	Q9NY93	547 aa	Known RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	LHX3	Q9UBR4	397 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	SUSD2	Q9UGT4	822 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	DUSP10	Q9Y6W6	482 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	PCNX2	A6NKB5	2137 aa		19.93	■□□□□ 0.78
ARF3-208	ENST00000541959	ZNF235	Q14590	738 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	PPM1J	Q5JR12	505 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	LRRC38	Q5VT99	294 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	AGBL4	Q5VU57	503 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	ERN2	Q76MJ5	926 aa	Known RBP	19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	RABEPK	Q7Z6M1	372 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	RFX6	Q8HWS3	928 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	PLPP6	Q8IY26	295 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	PAF1	Q8N7H5	531 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	TPCN2	Q8NHX9	752 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	CEP76	Q8TAP6	659 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	BIRC7	Q96CA5	298 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	KLHL32	Q96NJ5	620 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	LACRT	Q9GZZ8	138 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	TMEM9B	Q9NQ34	198 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	SALL4	Q9UJQ4	1053 aa		19.92	■□□□□ 0.78
ARF3-208	ENST00000541959	CDX4	O14627	284 aa	Predicted RBP	19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	INSIG1	O15503	277 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	SLC7A4	O43246	635 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	MAT2A	P31153	395 aa	Known RBP	19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	NEK3	P51956	506 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	KIF5A	Q12840	1032 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	LBR	Q14739	615 aa	Known RBP	19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	PIP5KL1	Q5T9C9	394 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	TMCO4	Q5TGY1	634 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	C11orf63	Q6NUN7	778 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	FBXL19	Q6PCT2	694 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	TSEN2	Q8NCE0	465 aa	Known RBP	19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	RNF157	Q96PX1	679 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	FSCN3	Q9NQT6	498 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	SLC6A14	Q9UN76	642 aa		19.91	■□□□□ 0.78
ARF3-208	ENST00000541959	PCDH15	Q96QU1	1955 aa		19.9	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 313.3 ms