RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ENDOVQ8N8Q3 282 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CLEC4CQ8WTT0 213 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 GLMPQ8WWB7 406 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CNOT9Q92600 299 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 USP6NLQ92738 828 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 NSUN4Q96CB9 384 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 RNFT2Q96EX2 444 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 WDYHV1Q96HA8 205 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 YME1L1Q96TA2 773 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 NPLQ9BXD5 320 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 TRIM2Q9C040 744 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 PRSS22Q9GZN4 317 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CTDSP1Q9GZU7 261 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CDCP1Q9H5V8 836 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 SH2D4AQ9H788 454 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 IL21RQ9HBE5 538 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 HCFC1R1Q9NWW0 138 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 ASIC5Q9NY37 505 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 EHD2Q9NZN4 543 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 MPP6Q9NZW5 540 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 SNX8Q9Y5X2 465 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 PSAT1Q9Y617 370 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 PIAS3Q9Y6X2 628 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CDK13Q14004 1512 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 DHX29Q7Z478 1369 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 PREX2Q70Z35 1606 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CDK12Q9NYV4 1490 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 SAMD9LQ8IVG5 1584 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 RTEL1-TNFRSF6BF6WH68 1400 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 FAM170AA1A519 330 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 EIF3CLB5ME19 914 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 VILLO15195 856 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 SEC14L2O76054 403 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 LAMP2P13473 410 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 COX7A2P14406 83 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PTMSP20962 102 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ARHGAP25P42331 645 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 UFM1P61960 85 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 RPL7AP62424 266 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PTP4A2Q12974 167 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 DNASE1L3Q13609 305 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 BYSLQ13895 437 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CRYMQ14894 314 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 DAZAP2Q15038 168 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PLCB4Q15147 1175 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CNGA3Q16281 694 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 GXYLT1Q4G148 440 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ZNF766Q5HY98 468 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 EPHA10Q5JZY3 1008 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 GPR139Q6DWJ6 353 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CYP20A1Q6UW02 462 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 KIAA1324Q6UXG2 1013 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ZNF813Q6ZN06 617 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 VPS52Q8N1B4 723 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 GHDCQ8N2G8 530 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 KLHL29Q96CT2 875 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ELP4Q96EB1 424 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 FAM120BQ96EK7 910 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 BAG1Q99933 345 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 LBHD1Q9BQE6 289 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 HERC2P3Q9BVR0 1158 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ELOVL1Q9BW60 279 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PHF7Q9BWX1 381 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ITPAQ9BY32 194 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 TTYH1Q9H313 450 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 TTC12Q9H892 705 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 KAT14Q9H8E8 782 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 SAP30LQ9HAJ7 183 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PDGFCQ9NRA1 345 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 NFKBIL1Q9UBC1 381 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 KLQ9UEF7 1012 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CHORDC1Q9UHD1 332 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CORO1CQ9ULV4 474 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PCDHGB4Q9UN71 923 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 KCNE2Q9Y6J6 123 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ABCC1P33527 1531 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 SETD1AO15047 1707 aaKnown RBP4.49□□□□□ -1.69
SNHG1-217ENST00000541578 PHLPP1O60346 1717 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CDC42BPAQ5VT25 1732 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 CCDC18Q5T9S5 1454 aa4.49□□□□□ -1.69
SNHG1-217ENST00000541578 ATP7AQ04656 1500 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MYO1GB0I1T2 1018 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 M0QZQ0 153 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 DKC1O60832 514 aaKnown RBP eCLIP4.48□□□□□ -1.691e-36■■□□□ 12.2
SNHG1-217ENST00000541578 SGPL1O95470 568 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 DNTTP04053 509 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 CSH1P0DML2 217 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 CSH2P0DML3 217 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 APEHP13798 732 aaKnown RBP4.48□□□□□ -1.69
SNHG1-217ENST00000541578 DUSP1P28562 367 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MCM5P33992 734 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 PTGER1P34995 402 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 MMP13P45452 471 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 LMAN1P49257 510 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 NLRP5P59047 1200 aa4.48□□□□□ -1.69
SNHG1-217ENST00000541578 DEUP1Q05D60 604 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms