RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 STRA6Q9BX79 667 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 PLA2G12BQ9BX93 195 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TTYH1Q9H313 450 aaPredicted RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 SLC32A1Q9H598 525 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TTC12Q9H892 705 aaPredicted RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 ATAD3AQ9NVI7 634 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 HSPBP1Q9NZL4 362 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 SH3BP4Q9P0V3 963 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 LRIT1Q9P2V4 623 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 XPR1Q9UBH6 696 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 FBLN5Q9UBX5 448 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 TRMT112Q9UI30 125 aaKnown RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 CD207Q9UJ71 328 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 BAG5Q9UL15 447 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 HPSEQ9Y251 543 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 CHKBQ9Y259 395 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 PTRH2Q9Y3E5 179 aaKnown RBP5.7□□□□□ -1.5
DDB1-219ENST00000541513 ENTPD2Q9Y5L3 495 aa5.7□□□□□ -1.5
DDB1-219ENST00000541513 GOLGB1Q14789 3259 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 CCDC88AQ3V6T2 1871 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 LRRC37AA6NMS7 1700 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 A0A1W2PQF6 199 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 ZSCAN5CA6NGD5 496 aaPredicted RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 KIF28PB7ZC32 967 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 GRM8O00222 908 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CD3EAPO15446 510 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 TEX33O43247 280 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CEP104O60308 925 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 E2F6O75461 281 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 RB1P06400 928 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 TPBGLP0DKB5 382 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 PNLIPP16233 465 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 ZFXP17010 805 aaPredicted RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 ERCC2P18074 760 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 TTKP33981 857 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 THBS2P35442 1172 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 VIPR2P41587 438 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 MAP2K3P46734 347 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 PTDSS1P48651 473 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 UFM1P61960 85 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 ASIC1P78348 528 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CD69Q07108 199 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 GOLGA8DPQ0D2H9 430 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CSHL1Q14406 222 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 PDK1Q15118 436 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 SHEQ5VZ18 495 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 ZCCHC12Q6PEW1 402 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 MTHFD1LQ6UB35 978 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 GBP6Q6ZN66 633 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 SLCO4C1Q6ZQN7 724 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 MIER3Q7Z3K6 550 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CACNA2D4Q7Z3S7 1137 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 FAM160B2Q86V87 743 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 KBTBD6Q86V97 674 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 WFDC3Q8IUB2 231 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 RHPN2Q8IUC4 686 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 DRAXINQ8NBI3 349 aaPredicted RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 DNERQ8NFT8 737 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 FAM89AQ96GI7 184 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 MASTLQ96GX5 879 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CD180Q99467 661 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 PKP4Q99569 1192 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 GPR20Q99678 358 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 MESP1Q9BRJ9 268 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 PAAF1Q9BRP4 392 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 HERC2P3Q9BVR0 1158 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 TRIM31Q9BZY9 425 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 C11orf54Q9H0W9 315 aaPredicted RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 SLAMF7Q9NQ25 335 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.69□□□□□ -1.5
DDB1-219ENST00000541513 CNIH4Q9P003 139 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 DNMT3BQ9UBC3 853 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 AMACRQ9UHK6 382 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 FAM153AQ9UHL3 310 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 TNNQ9UQP3 1299 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 OSGIN2Q9Y236 505 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 DRG1Q9Y295 367 aaKnown RBP5.69□□□□□ -1.5
DDB1-219ENST00000541513 JRKLQ9Y4A0 524 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CLCA3PQ9Y6N3 262 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 CHD4Q14839 1912 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 A0A1B0GUL6 1792 aa5.69□□□□□ -1.5
DDB1-219ENST00000541513 FER1L6Q2WGJ9 1857 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 RTL9Q8NET4 1388 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DICER1Q9UPY3 1922 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 LOC100509620A0A075B734 347 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 KPNA7A9QM74 516 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 H0YIN7 160 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 M0R082 166 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 IFIT3O14879 490 aaKnown RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 LDLRAD4O15165 306 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
DDB1-219ENST00000541513 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
DDB1-219ENST00000541513 SLC43A1O75387 559 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms