RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 EPHA5P54756 1037 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 MGAT5Q09328 741 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 GPR158Q5T848 1215 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 MROH9Q5TGP6 573 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 TTC39BQ5VTQ0 682 aaPredicted RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ESRP1Q6NXG1 681 aaKnown RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CYS1Q717R9 158 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 LRRC34Q8IZ02 419 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ACVR1CQ8NER5 493 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF473Q8WTR7 871 aaKnown RBP12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 ALG14Q96F25 216 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 SMC6Q96SB8 1091 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 KIFC1Q9BW19 673 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 CCDC134Q9H6E4 229 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM169AQ9Y6X4 670 aa12.44□□□□□ -0.42
AP003559.1-201ENST00000540906 TNRC18O15417 2968 aaPredicted RBP12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 TRAV19A0A0A6YYK7 116 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 CBX4O00257 560 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 LATS1O95835 1130 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 C1RP00736 705 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 MT-ND3P03897 115 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 RHOP08100 348 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 SNRPAP09012 282 aaKnown RBP12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 CDC25CP30307 473 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 NEK3P51956 506 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 SLC18A2Q05940 514 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 MPP3Q13368 585 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 HSP90AA5PQ58FG0 334 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 PKN3Q6P5Z2 889 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 TPGS1Q6ZTW0 290 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 HTR3DQ70Z44 454 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 LINC00523Q86TU6 105 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 CCNJLQ8IV13 435 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 APCDD1Q8J025 514 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 PNPLA1Q8N8W4 532 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 CKAP2Q8WWK9 683 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 ZSWIM3Q96MP5 696 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 FSD1LQ9BXM9 530 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 IL22Q9GZX6 179 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 NOD2Q9HC29 1040 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 UBA2Q9UBT2 640 aaPredicted RBP12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 TCAF1Q9Y4C2 921 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 IKBKGQ9Y6K9 419 aa12.43□□□□□ -0.42
AP003559.1-201ENST00000540906 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 H0Y626 953 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 CCL22O00626 93 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 CA4P22748 312 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 ADRA1DP25100 572 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 PGGT1BP53609 377 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 UBE3AQ05086 875 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF235Q14590 738 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 ZSCAN26Q16670 478 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 PCID2Q5JVF3 399 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 SIRPB2Q5JXA9 342 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 TEDDM1Q5T9Z0 273 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 SETD3Q86TU7 594 aaPredicted RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 ELMOD1Q8N336 334 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 HJURPQ8NCD3 748 aaPredicted RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 TCP10LQ8TDR4 215 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 NSMCE1Q8WV22 266 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF707Q96C28 371 aaPredicted RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 PAIP2Q9BPZ3 127 aaKnown RBP12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 NAT9Q9BTE0 207 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 MUC3BQ9H195 1237 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 SENP1Q9P0U3 644 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 GGT7Q9UJ14 662 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 KCTD3Q9Y597 815 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
AP003559.1-201ENST00000540906 LOC285095A0A1B0GVY8 99 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 SRRM3A6NNA2 597 aaPredicted RBP12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 K7ERQ8 282 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 FAM107AO95990 144 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 MT-CO1P00395 513 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 CR2P20023 1033 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 CCNFP41002 786 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 CCT5P48643 541 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 GPM6BQ13491 265 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 SEPT6Q14141 434 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 GALNT3Q14435 633 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 PRSS36Q5K4E3 855 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 ALG1LQ6GMV1 187 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 GRASPQ7Z6J2 395 aaPredicted RBP12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 ING5Q8WYH8 240 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 ATXN7L3BQ96GX2 97 aa12.41□□□□□ -0.42
AP003559.1-201ENST00000540906 ZNF599Q96NL3 588 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms