RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 BTBD19C9JJ37 291 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 TRIM38O00635 465 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PSMD8P48556 350 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 RAB10P61026 200 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 SOX4Q06945 474 aaPredicted RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 APOFQ13790 326 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 ARL13BQ3SXY8 428 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 IYDQ6PHW0 289 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 CNTN4Q8IWV2 1026 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 KLHDC8BQ8IXV7 354 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 ZFP28Q8NHY6 868 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 DPF3Q92784 378 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 PGAP3Q96FM1 320 aaPredicted RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 SLC2A11Q9BYW1 496 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 XPR1Q9UBH6 696 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PADI4Q9UM07 663 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 YJEFN3A6XGL0 299 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 CACNG3O60359 315 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 RNASEH2AO75792 299 aaKnown RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 VAPBO95292 243 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 DAOAP59103 153 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 MYLK3Q32MK0 819 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PCID2Q5JVF3 399 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 TSTD2Q5T7W7 516 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 CEP70Q8NHQ1 597 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 RNF217Q8TC41 542 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 NXNL1Q96CM4 212 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 ASB9Q96DX5 294 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 PRPF18Q99633 342 aaKnown RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 MRPL1Q9BYD6 325 aaKnown RBP12.45□□□□□ -0.42
NPC1-202ENST00000540608 ULBP1Q9BZM6 244 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 GRIP2Q9C0E4 1043 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 EPS15L1Q9UBC2 864 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
NPC1-202ENST00000540608 CCDC78A2IDD5 438 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 RRN3P2A6NIE6 340 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 H0YJX3 145 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 SDHDO14521 159 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DARSP14868 501 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPC1-202ENST00000540608 ZNF26P17031 533 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 AXLP30530 894 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 ATXN3P54252 364 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 PTK2BQ14289 1009 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 ADRM1Q16186 407 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DGKDQ16760 1214 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DUSP28Q4G0W2 176 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 BORAQ6PGQ7 559 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 ISLR2Q6UXK2 745 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 EGFL6Q8IUX8 553 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 CCNYL1Q8N7R7 359 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 FAM81AQ8TBF8 368 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 SENP6Q9GZR1 1112 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 NCKIPSDQ9NZQ3 722 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 PHF24Q9UPV7 400 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DNAH12Q6ZR08 3092 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 ARHGAP10A1A4S6 786 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 PDHXO00330 501 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 PGK1P00558 417 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 FAM163BP0C2L3 166 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 FAM200BP0CF97 657 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 NCAM1P13591 858 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 STMN1P16949 149 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DNAJB13P59910 316 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 PSME3P61289 254 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 TRIM25Q14258 630 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 MGAT5BQ3V5L5 792 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 SH2D4BQ5SQS7 431 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 PELI3Q8N2H9 469 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 LENG1Q96BZ8 264 aaPredicted RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 TSGA13Q96PP4 275 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 MRPL46Q9H2W6 279 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 MRGBPQ9NV56 204 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 DDIT4Q9NX09 232 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 ADA2Q9NZK5 511 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 SUCOQ9UBS9 1254 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 AAR2Q9Y312 384 aaKnown RBP12.44□□□□□ -0.42
NPC1-202ENST00000540608 PCDHGA7Q9Y5G6 932 aa12.44□□□□□ -0.42
NPC1-202ENST00000540608 GABRDO14764 452 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 F9P00740 461 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 NR1H2P55055 460 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms