RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 NEU3Q9UQ49 428 aa17.01■□□□□ 0.31
PSMD3-204ENST00000540504 A0A087WV48 116 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 ANKRD62A6NC57 917 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 SIGLEC6O43699 453 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 PIAS2O75928 621 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 CCDC172P0C7W6 258 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 ALPPL2P10696 532 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 AIF1P55008 147 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 E2F1Q01094 437 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 UBXN1Q04323 297 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
PSMD3-204ENST00000540504 STX1AQ16623 288 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 ZNF805Q5CZA5 627 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 C19orf48Q6RUI8 117 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 KYAT3Q6YP21 454 aaKnown RBP17■□□□□ 0.31
PSMD3-204ENST00000540504 Q6ZSR6 202 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 PARS2Q7L3T8 475 aaKnown RBP17■□□□□ 0.31
PSMD3-204ENST00000540504 CCDC185Q8N715 623 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 ARHGEF26Q96DR7 871 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
PSMD3-204ENST00000540504 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 NRSN2Q9GZP1 204 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 GPR27Q9NS67 375 aa17■□□□□ 0.31
PSMD3-204ENST00000540504 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 GOLGA6L22H0YM25 854 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 TRIM38O00635 465 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 KDELR3O43731 214 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 GJB6O95452 261 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 POP4O95707 220 aaKnown RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 PAK4O96013 591 aaPredicted RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 DESP17661 470 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 CDK11BP21127 795 aaKnown RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 RABIFP47224 123 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 ZNF143P52747 638 aaPredicted RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 CLDN2P57739 230 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 YBEYP58557 167 aaPredicted RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 HNRNPKP61978 463 aaKnown RBP eCLIP16.99■□□□□ 0.318e-8■■■■□ 25.2
PSMD3-204ENST00000540504 DAB2P98082 770 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 RAD51Q06609 339 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 TARDBPQ13148 414 aaKnown RBP eCLIP16.99■□□□□ 0.312e-7■■■□□ 15.4
PSMD3-204ENST00000540504 SGCGQ13326 291 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 RTP5Q14D33 572 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 COL28A1Q2UY09 1125 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 EFHC2Q5JST6 749 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 MON1BQ7L1V2 547 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 RYBPQ8N488 228 aaPredicted RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 RTL3Q8N8U3 475 aaKnown RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 BMFQ96LC9 184 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 C1QTNF2Q9BXJ5 285 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 SEPT11Q9NVA2 429 aaKnown RBP16.99■□□□□ 0.31
PSMD3-204ENST00000540504 EVA1BQ9NVM1 165 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 ACTL7AQ9Y615 435 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 MYLKQ15746 1914 aa16.99■□□□□ 0.31
PSMD3-204ENST00000540504 C16orf96A6NNT2 1141 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 KRIT1O00522 736 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 FPGTO14772 594 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 EPHB2P29323 1055 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 FGL2Q14314 439 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 MYLK3Q32MK0 819 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 INO80DQ53TQ3 878 aaPredicted RBP16.98■□□□□ 0.31
PSMD3-204ENST00000540504 PPP1R2P3Q6NXS1 205 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 DNAJC24Q6P3W2 148 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 PTAR1Q7Z6K3 402 aaPredicted RBP16.98■□□□□ 0.31
PSMD3-204ENST00000540504 PDZD3Q86UT5 571 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 SLC22A18ASQ8N1D0 253 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 DENND6BQ8NEG7 585 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 HNRNPLLQ8WVV9 542 aaKnown RBP16.98■□□□□ 0.31
PSMD3-204ENST00000540504 AGPAT1Q99943 283 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 DUSP23Q9BVJ7 150 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 MAGEB5Q9BZ81 275 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 USP29Q9HBJ7 922 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 UCKL1Q9NWZ5 548 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 DONSONQ9NYP3 566 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 NLGN3Q9NZ94 848 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 CLCA2Q9UQC9 943 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 APC2O95996 2303 aa16.98■□□□□ 0.31
PSMD3-204ENST00000540504 TDRD6O60522 2096 aaKnown RBP16.98■□□□□ 0.31
PSMD3-204ENST00000540504 URB1O60287 2271 aaKnown RBP16.98■□□□□ 0.31
PSMD3-204ENST00000540504 SPTY2D1-AS1A0A0U1RR47 76 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 TCRBV5S1A1TA0A578 114 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 POM121BA6NF01 834 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 H3BM21 787 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 NEMP1O14524 444 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 RIOK3O14730 519 aaKnown RBP16.97■□□□□ 0.31
PSMD3-204ENST00000540504 SCAMP1O15126 338 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 CCP110O43303 1012 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 BUB1O43683 1085 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 CKMT1AP12532 417 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 FERP16591 822 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 HTR7P34969 479 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 ABL2P42684 1182 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 DCBLD1Q8N8Z6 715 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 FAM181AQ8N9Y4 354 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 GDAP1L1Q96MZ0 367 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 KLF6Q99612 283 aaPredicted RBP16.97■□□□□ 0.31
PSMD3-204ENST00000540504 CNPY3Q9BT09 278 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 TTYH3Q9C0H2 523 aa16.97■□□□□ 0.31
PSMD3-204ENST00000540504 CATSPERBQ9H7T0 1116 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms