RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 VTNP04004 478 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 HNRNPLP14866 589 aaKnown RBP eCLIP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 YBX3P16989 372 aaKnown RBP eCLIP13.15□□□□□ -0.39e-7■■□□□ 11.9
DNMT1-203ENST00000540357 SLC5A3P53794 718 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 AIF1P55008 147 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 RALGDSQ12967 914 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 ANGPTL8Q6UXH0 198 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 PROSER1Q86XN7 944 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 DGCR6LQ9BY27 220 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 GRIN3BO60391 1043 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 METTL18O95568 372 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 ANKS6Q68DC2 871 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 FBXO39Q8N4B4 442 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 TMEM174Q8WUU8 243 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CENPNQ96H22 339 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 KCNK13Q9HB14 408 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 SNNO75324 88 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 VPS26AO75436 327 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 BCAS2O75934 225 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 MYO1DO94832 1006 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 AP2A1O95782 977 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CPB1P15086 417 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 ETV4P43268 484 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 CBR4Q8N4T8 237 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 OXSMQ9NWU1 459 aa13.15□□□□□ -0.3
DNMT1-203ENST00000540357 TRNAU1APQ9NX07 287 aaKnown RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-203ENST00000540357 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 MSH3P20585 1137 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 PCLAFQ15004 111 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SPATA2LQ8IUW3 424 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CLYBLQ8N0X4 340 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 FIG4Q92562 907 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 APOL4Q9BPW4 351 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 PIF1Q9H611 641 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SUCOQ9UBS9 1254 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 MAFBQ9Y5Q3 323 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 DPYSL4O14531 572 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 OR6B1O95007 311 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ST13P50502 369 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 GTF2H3Q13889 308 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 TMEM26Q6ZUK4 368 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 PKP2Q99959 881 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 TRIM54Q9BYV2 358 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 RMND5AQ9H871 391 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 USE1Q9NZ43 259 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF536O15090 1300 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CAPN14A8MX76 684 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SLC2A3P11169 496 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CCT8P50990 548 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 NDUFA5Q16718 116 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 HS6ST1O60243 411 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 WDR47O94967 919 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 GPIP06744 558 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 IDO1P14902 403 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 RGS4P49798 205 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 FAM9CQ8IZT9 166 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 BLOC1S5Q8TDH9 187 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ALG9Q9H6U8 611 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 CD320Q9NPF0 282 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
DNMT1-203ENST00000540357 MFSD11O43934 449 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 UMPSP11172 480 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 NRLP54845 237 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 TLR1Q15399 786 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 IL23RQ5VWK5 629 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 POTEHQ6S545 545 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 ADHFE1Q8IWW8 467 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
DNMT1-203ENST00000540357 OLFM1Q99784 485 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 MAF1Q9H063 256 aa13.13□□□□□ -0.31
DNMT1-203ENST00000540357 CACYBPQ9HB71 228 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms