RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 SP110Q9HB58 689 aa13.61□□□□□ -0.23
CCDC130-202ENST00000540216 TMEM9BQ9NQ34 198 aa13.61□□□□□ -0.23
CCDC130-202ENST00000540216 RXFP3Q9NSD7 469 aa13.61□□□□□ -0.23
CCDC130-202ENST00000540216 MFHAS1Q9Y4C4 1052 aa13.61□□□□□ -0.23
CCDC130-202ENST00000540216 PCDH15Q96QU1 1955 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 DMXL1Q9Y485 3027 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3DA0A087WVF3 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3IA0A087WXS9 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3EA0A087X179 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3KA0A087X1G2 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 A0A0A6YYK5 440 aaPredicted RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3FA6NER0 549 aaPredicted RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 GOLGA6L6A8MZA4 724 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 ZNF487B1APH4 448 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3LB9A6J9 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 J3KR12 359 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 KRIT1O00522 736 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 ARHGAP33O14559 1287 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3HP0C7X1 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 AMPD1P23109 780 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 GJC1P36383 396 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 GRIA4P48058 902 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 ATXN3P54252 364 aaPredicted RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 IL10RBQ08334 325 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 DPYSL3Q14195 570 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 LRRC38Q5VT99 294 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3GQ6DHY5 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3CQ6IPX1 549 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 TBC1D3Q8IZP1 549 aaPredicted RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 CALN1Q9BXU9 219 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 IPO11Q9UI26 975 aaKnown RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 PCDHA13Q9Y5I0 950 aa13.6□□□□□ -0.23
CCDC130-202ENST00000540216 EPN1Q9Y6I3 576 aaPredicted RBP13.6□□□□□ -0.23
CCDC130-202ENST00000540216 SOWAHDA6NJG2 315 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 PLK4O00444 970 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 AP1G1O43747 822 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 PALMO75781 387 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 NDUFA10O95299 355 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ADRB3P13945 408 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 IL4RP24394 825 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 TAS2R38P59533 333 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 RACK1P63244 317 aaKnown RBP13.59□□□□□ -0.23
CCDC130-202ENST00000540216 CYTH1Q15438 398 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ZNF805Q5CZA5 627 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
CCDC130-202ENST00000540216 IL27RAQ6UWB1 636 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 PRPF39Q86UA1 669 aaKnown RBP13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 CPNE8Q86YQ8 564 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 OR6K2Q8NGY2 324 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 SKA1Q96BD8 255 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 FAF2Q96CS3 445 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 TUBGCP5Q96RT8 1024 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
CCDC130-202ENST00000540216 ORAI3Q9BRQ5 295 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
CCDC130-202ENST00000540216 TM9SF3Q9HD45 589 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 LHX3Q9UBR4 397 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 SEPT3Q9UH03 358 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 DMTF1Q9Y222 760 aa13.59□□□□□ -0.23
CCDC130-202ENST00000540216 C4orf47A7E2U8 309 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 CDX4O14627 284 aaPredicted RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 CD48P09326 243 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 HSPA9P38646 679 aaKnown RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 MAPK8P45983 427 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 CSNK1DP48730 415 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 RENBPP51606 427 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 PPP2CBP62714 309 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 PPP2CAP67775 309 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 NSUN2Q08J23 767 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 GRIK2Q13002 908 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 SETMARQ53H47 684 aaPredicted RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 SLC45A4Q5BKX6 768 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 ANKRD20A8PQ5CZ79 823 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 FBXL19Q6PCT2 694 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 RHOT1Q8IXI2 618 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 GTPBP2Q9BX10 602 aaKnown RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 KLHL11Q9NVR0 708 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
CCDC130-202ENST00000540216 DKK3Q9UBP4 350 aa13.58□□□□□ -0.24
CCDC130-202ENST00000540216 LRRD1A4D1F6 860 aa13.57□□□□□ -0.24
CCDC130-202ENST00000540216 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
CCDC130-202ENST00000540216 RNF103O00237 685 aa13.57□□□□□ -0.24
CCDC130-202ENST00000540216 PSTPIP1O43586 416 aa13.57□□□□□ -0.24
CCDC130-202ENST00000540216 SPOPO43791 374 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms