RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LMAN2LQ9H0V9 348 aa8.8□□□□□ -1
DDB1-217ENST00000540166 RSAD1Q9HA92 442 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TMEM161AQ9NX61 479 aa8.8□□□□□ -1
DDB1-217ENST00000540166 EBF1Q9UH73 591 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SNX5Q9Y5X3 404 aa8.8□□□□□ -1
DDB1-217ENST00000540166 KAT6AQ92794 2004 aa8.8□□□□□ -1
DDB1-217ENST00000540166 NT5C1B-RDH14C9J2C7 533 aa8.8□□□□□ -1
DDB1-217ENST00000540166 F8VP50 259 aa8.8□□□□□ -1
DDB1-217ENST00000540166 AP3B1O00203 1094 aa8.8□□□□□ -1
DDB1-217ENST00000540166 GLRA3O75311 464 aa8.8□□□□□ -1
DDB1-217ENST00000540166 DLGAP3O95886 979 aa8.8□□□□□ -1
DDB1-217ENST00000540166 KRT7P08729 469 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TMEM191BP0C7N4 346 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SAT1P21673 171 aa8.8□□□□□ -1
DDB1-217ENST00000540166 RPL7AP62424 266 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 GCNT1Q02742 428 aa8.8□□□□□ -1
DDB1-217ENST00000540166 NME3Q13232 169 aa8.8□□□□□ -1
DDB1-217ENST00000540166 CYP2A13Q16696 494 aa8.8□□□□□ -1
DDB1-217ENST00000540166 NOMO2Q5JPE7 1267 aa8.8□□□□□ -1
DDB1-217ENST00000540166 FNBP1LQ5T0N5 605 aa8.8□□□□□ -1
DDB1-217ENST00000540166 N4BP2L1Q5TBK1 243 aaPredicted RBP8.8□□□□□ -1
DDB1-217ENST00000540166 CYP4A22Q5TCH4 519 aa8.8□□□□□ -1
DDB1-217ENST00000540166 UTS2BQ765I0 119 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SLC43A3Q8NBI5 491 aa8.8□□□□□ -1
DDB1-217ENST00000540166 DCAKDQ8WVC6 231 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TOP1MTQ969P6 601 aa8.8□□□□□ -1
DDB1-217ENST00000540166 FIZ1Q96SL8 496 aa8.8□□□□□ -1
DDB1-217ENST00000540166 CIB1Q99828 191 aa8.8□□□□□ -1
DDB1-217ENST00000540166 WDR41Q9HAD4 459 aa8.8□□□□□ -1
DDB1-217ENST00000540166 NGRNQ9NPE2 291 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 VPS51Q9UID3 782 aa8.8□□□□□ -1
DDB1-217ENST00000540166 FIS1Q9Y3D6 152 aa8.8□□□□□ -1
DDB1-217ENST00000540166 E2F8A0AVK6 867 aa8.79□□□□□ -1
DDB1-217ENST00000540166 FAM155BO75949 473 aa8.79□□□□□ -1
DDB1-217ENST00000540166 MFN2O95140 757 aa8.79□□□□□ -1
DDB1-217ENST00000540166 POLR2EP19388 210 aaKnown RBP8.79□□□□□ -1
DDB1-217ENST00000540166 TBXAS1P24557 533 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 KLF10Q13118 480 aa8.79□□□□□ -1
DDB1-217ENST00000540166 MAMLD1Q13495 774 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CUL2Q13617 745 aa8.79□□□□□ -1
DDB1-217ENST00000540166 LDLRAP1Q5SW96 308 aa8.79□□□□□ -1
DDB1-217ENST00000540166 RSBN1Q5VWQ0 802 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 ABHD15Q6UXT9 468 aa8.79□□□□□ -1
DDB1-217ENST00000540166 FRMD7Q6ZUT3 714 aa8.79□□□□□ -1
DDB1-217ENST00000540166 GJD3Q8N144 294 aa8.79□□□□□ -1
DDB1-217ENST00000540166 SPATA18Q8TC71 538 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PKP2Q99959 881 aa8.79□□□□□ -1
DDB1-217ENST00000540166 RAD21L1Q9H4I0 556 aa8.79□□□□□ -1
DDB1-217ENST00000540166 COQ10BQ9H8M1 238 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PNPOQ9NVS9 261 aa8.79□□□□□ -1
DDB1-217ENST00000540166 COPG2Q9UBF2 871 aa8.79□□□□□ -1
DDB1-217ENST00000540166 DPYSL4O14531 572 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PHGDHO43175 533 aaKnown RBP8.79□□□□□ -1
DDB1-217ENST00000540166 MYO1DO94832 1006 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ENO2P09104 434 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 PABPC1P11940 636 aaKnown RBP8.79□□□□□ -1
DDB1-217ENST00000540166 DPYSQ14117 519 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ZNF846Q147U1 533 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CDO1Q16878 200 aa8.79□□□□□ -1
DDB1-217ENST00000540166 KBTBD6Q86V97 674 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CCDC103Q8IW40 242 aa8.79□□□□□ -1
DDB1-217ENST00000540166 GABPB2Q8TAK5 448 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 BHMTQ93088 406 aa8.79□□□□□ -1
DDB1-217ENST00000540166 MRPL38Q96DV4 380 aaKnown RBP8.79□□□□□ -1
DDB1-217ENST00000540166 HERPUD2Q9BSE4 406 aa8.79□□□□□ -1
DDB1-217ENST00000540166 MARCH7Q9H992 704 aa8.79□□□□□ -1
DDB1-217ENST00000540166 TLR9Q9NR96 1032 aa8.79□□□□□ -1
DDB1-217ENST00000540166 SMYD2Q9NRG4 433 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CD207Q9UJ71 328 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ITM2BQ9Y287 266 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 SDR42E2A6NKP2 422 aa8.79□□□□□ -1
DDB1-217ENST00000540166 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PSMD11O00231 422 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ITGAVP06756 1048 aa8.79□□□□□ -1
DDB1-217ENST00000540166 RPL22P35268 128 aaKnown RBP8.79□□□□□ -1
DDB1-217ENST00000540166 RAD23AP54725 363 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PRPSAP1Q14558 356 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ZNF568Q3ZCX4 644 aa8.79□□□□□ -1
DDB1-217ENST00000540166 TCEAL5Q5H9L2 206 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PPM1LQ5SGD2 360 aa8.79□□□□□ -1
DDB1-217ENST00000540166 VWA5B1Q5TIE3 1220 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CYP2R1Q6VVX0 501 aa8.79□□□□□ -1
DDB1-217ENST00000540166 CDR2LQ86X02 465 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 TRIM15Q9C019 465 aa8.79□□□□□ -1
DDB1-217ENST00000540166 XPNPEP1Q9NQW7 623 aa8.79□□□□□ -1
DDB1-217ENST00000540166 MRGBPQ9NV56 204 aa8.79□□□□□ -1
DDB1-217ENST00000540166 PRMT7Q9NVM4 692 aaPredicted RBP8.79□□□□□ -1
DDB1-217ENST00000540166 CLUHO75153 1309 aa8.79□□□□□ -1
DDB1-217ENST00000540166 ATAD5Q96QE3 1844 aa8.78□□□□□ -1
DDB1-217ENST00000540166 RGSL1A5PLK6 1076 aa8.78□□□□□ -1
DDB1-217ENST00000540166 TNFRSF10AO00220 468 aa8.78□□□□□ -1
DDB1-217ENST00000540166 PER2O15055 1255 aa8.78□□□□□ -1
DDB1-217ENST00000540166 RGS20O76081 388 aa8.78□□□□□ -1
DDB1-217ENST00000540166 CCDC159P0C7I6 412 aa8.78□□□□□ -1
DDB1-217ENST00000540166 TSHRP16473 764 aa8.78□□□□□ -1
DDB1-217ENST00000540166 STMN1P16949 149 aa8.78□□□□□ -1
DDB1-217ENST00000540166 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
DDB1-217ENST00000540166 ATICP31939 592 aa8.78□□□□□ -1
DDB1-217ENST00000540166 ETFBP38117 255 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms