RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TNKS2Q9H2K2 1166 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DPH5Q9H2P9 285 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ETNK1Q9HBU6 452 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZDHHC4Q9NPG8 344 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RAB6BQ9NRW1 208 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 THAP10Q9P2Z0 257 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SNX24Q9Y343 169 aa19.2■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TTC34A8MYJ7 566 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CHRM1P11229 460 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 F5P12259 2224 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CR2P20023 1033 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DRD1P21728 446 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 HSPA9P38646 679 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KIR2DL1P43626 348 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RPL21P46778 160 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ST8SIA6P61647 398 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DSC2Q02487 901 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GUCY2DQ02846 1103 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GRSF1Q12849 480 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 IHHQ14623 411 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TRADDQ15628 312 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ERCC6LQ2NKX8 1250 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 C4orf22Q6V702 233 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TMEM105Q8N8V8 129 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRSS33Q8NF86 280 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SPATA22Q8NHS9 363 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ISG20Q96AZ6 181 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NSMCE3Q96MG7 304 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FCRL5Q96RD9 977 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ACOX2Q99424 681 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SEMA3CQ99985 751 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CEP44Q9C0F1 390 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MFSD1Q9H3U5 465 aa19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MTF2Q9Y483 593 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ESYT3A0FGR9 886 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FDFT1P37268 417 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SCNN1BP51168 640 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SEC13P55735 322 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 BASP1P80723 227 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NSUN2Q08J23 767 aaKnown RBP eCLIP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NAA30Q147X3 362 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FNDC3BQ53EP0 1204 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ATXN7L2Q5T6C5 722 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 Q6ZVU0 165 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRPF39Q86UA1 669 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PCDH20Q8N6Y1 951 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF366Q8N895 744 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 KDM1BQ8NB78 822 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SEC14L1Q92503 715 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 LRRC45Q96CN5 670 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FAM122AQ96E09 287 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 IMP4Q96G21 291 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 OXNAD1Q96HP4 312 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FOXQ1Q9C009 403 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SLC25A51Q9H1U9 297 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MTG2Q9H4K7 406 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ANKZF1Q9H8Y5 726 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 EPB41L5Q9HCM4 733 aa19.18■□□□□ 0.66
TNFRSF1A-213ENST00000540022 WASH3PC4AMC7 463 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MAN2B1O00754 1011 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DNALI1O14645 258 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MT-CYBP00156 380 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 MMP2P08253 660 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 HNRNPLP14866 589 aaKnown RBP eCLIP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 IL12RB1P42701 662 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 STARD6P59095 220 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 PRKCQQ04759 706 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SEMA5AQ13591 1074 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SYCP2LQ5T4T6 812 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF687Q8N1G0 1237 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF513Q8N8E2 541 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 OR2AP1Q8NGE2 309 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CPT1BQ92523 772 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 RBM15Q96T37 977 aaKnown RBP eCLIP19.17■□□□□ 0.662e-10■■■■□ 22.2
TNFRSF1A-213ENST00000540022 MLPHQ9BV36 600 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TMEM245Q9H330 911 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 HAUS2Q9NVX0 235 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CACNA2D2Q9NY47 1150 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 UBP1Q9NZI7 540 aa19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NDRG2Q9UN36 371 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1A-213ENST00000540022 BNIP3LO60238 219 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 HLA-EP13747 358 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TIE1P35590 1138 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CD86P42081 329 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CLCN5P51795 746 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 DRG2P55039 364 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 CARD16Q5EG05 197 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 IZUMO3Q5VZ72 239 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SERPINA13PQ6UXR4 307 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 ZNF852Q6ZMS4 543 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 FLCNQ8NFG4 579 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 OR6K2Q8NGY2 324 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SNF8Q96H20 258 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NUDCD1Q96RS6 583 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TBC1D17Q9HA65 648 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 NOD2Q9HC29 1040 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 GRHL1Q9NZI5 618 aa19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 TPX2Q9ULW0 747 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-213ENST00000540022 SLC8A2Q9UPR5 921 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms