RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MMGT1Q8N4V1 131 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 PJA1Q8NG27 643 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 OR2AP1Q8NGE2 309 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 OR2A12Q8NGT7 310 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 PTPRN2Q92932 1015 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 GDAP1L1Q96MZ0 367 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 SEMA3CQ99985 751 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 HAUS2Q9NVX0 235 aa23.84■■□□□ 1.41
TMEM260-202ENST00000538838 TECTAO75443 2155 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 EDDM13A0A1B0GTR0 161 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 ADAM23O75077 832 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 GSRP00390 522 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 PDGFBP01127 241 aaPredicted RBP23.83■■□□□ 1.41
TMEM260-202ENST00000538838 CR2P20023 1033 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 PSMB4P28070 264 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 ACTN2P35609 894 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 SCNN1BP51168 640 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 SNRPD1P62314 119 aaKnown RBP23.83■■□□□ 1.41
TMEM260-202ENST00000538838 NIPAL4Q0D2K0 466 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 CARD16Q5EG05 197 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 FAXCQ5TGI0 409 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 ALG1LQ6GMV1 187 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 ITPRIPL1Q6GPH6 555 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 C8orf74Q6P047 294 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 RYBPQ8N488 228 aaPredicted RBP23.83■■□□□ 1.41
TMEM260-202ENST00000538838 CCDC26Q8TAB7 109 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 NELL2Q99435 816 aa23.83■■□□□ 1.41
TMEM260-202ENST00000538838 INSIG1O15503 277 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 SIN3BO75182 1162 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 METTL18O95568 372 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 CCNHP51946 323 aaPredicted RBP23.82■■□□□ 1.4
TMEM260-202ENST00000538838 PTK6Q13882 451 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 DPY19L3Q6ZPD9 716 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 TRIM67Q6ZTA4 783 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 TRMT11Q7Z4G4 463 aaKnown RBP23.82■■□□□ 1.4
TMEM260-202ENST00000538838 CHST14Q8NCH0 376 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 FLCNQ8NFG4 579 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 ARRDC2Q8TBH0 407 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 NSMCE3Q96MG7 304 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 NUDCD1Q96RS6 583 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 GABRG3Q99928 467 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 GORASP1Q9BQQ3 440 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 SCUBE2Q9NQ36 999 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 PAK5Q9P286 719 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 EVLQ9UI08 416 aaPredicted RBP23.82■■□□□ 1.4
TMEM260-202ENST00000538838 MUC3AQ02505 3323 aa23.82■■□□□ 1.4
TMEM260-202ENST00000538838 GKP32189 559 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 RECQLP46063 649 aaPredicted RBP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 NSUN2Q08J23 767 aaKnown RBP eCLIP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 IHHQ14623 411 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 C9orf64Q5T6V5 341 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 MAATS1Q7Z4T9 603 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SRLQ86TD4 932 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SPATA22Q8NHS9 363 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 RBM15Q96T37 977 aaKnown RBP eCLIP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 LRRC1Q9BTT6 524 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SLC25A51Q9H1U9 297 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 MFSD1Q9H3U5 465 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 NOD2Q9HC29 1040 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 ASIC3Q9UHC3 531 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 MMP2P08253 660 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 HOXB2P14652 356 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 CD86P42081 329 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 GPS1Q13098 491 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SDE2Q6IQ49 451 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SYDE1Q6ZW31 735 aaPredicted RBP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SYNPOQ8N3V7 929 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 IMP4Q96G21 291 aaKnown RBP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 FCRL5Q96RD9 977 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 ZDHHC6Q9H6R6 413 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 PRSS16Q9NQE7 514 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 POLR3BQ9NW08 1133 aaPredicted RBP23.81■■□□□ 1.4
TMEM260-202ENST00000538838 SUN2Q9UH99 717 aa23.81■■□□□ 1.4
TMEM260-202ENST00000538838 TTC28Q96AY4 2481 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 FAM187AA6NFU0 413 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 RIOK3O14730 519 aaKnown RBP23.8■■□□□ 1.4
TMEM260-202ENST00000538838 SLU7O95391 586 aaKnown RBP23.8■■□□□ 1.4
TMEM260-202ENST00000538838 MT-CYBP00156 380 aaPredicted RBP23.8■■□□□ 1.4
TMEM260-202ENST00000538838 COL9A1P20849 921 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 TERF1P54274 439 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 CWF19L1Q69YN2 538 aaKnown RBP23.8■■□□□ 1.4
TMEM260-202ENST00000538838 KIAA1211LQ6NV74 962 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 STK40Q8N2I9 435 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 OXNAD1Q96HP4 312 aaPredicted RBP23.8■■□□□ 1.4
TMEM260-202ENST00000538838 RAB6BQ9NRW1 208 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 UBP1Q9NZI7 540 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 MMP17Q9ULZ9 603 aa23.8■■□□□ 1.4
TMEM260-202ENST00000538838 TARSL2A2RTX5 802 aaKnown RBP23.79■■□□□ 1.4
TMEM260-202ENST00000538838 ALADP13716 330 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 CSNK1DP48730 415 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 SKOR1P84550 965 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 GAS6Q14393 721 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 PARP6Q2NL67 630 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 MYLK3Q32MK0 819 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 HSF5Q4G112 596 aaPredicted RBP23.79■■□□□ 1.4
TMEM260-202ENST00000538838 NCEH1Q6PIU2 408 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 PRPF39Q86UA1 669 aaKnown RBP23.79■■□□□ 1.4
TMEM260-202ENST00000538838 PLPP6Q8IY26 295 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 GRIN3AQ8TCU5 1115 aa23.79■■□□□ 1.4
TMEM260-202ENST00000538838 VOPP1Q96AW1 172 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms