RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MCMBPQ9BTE3 642 aa18.82■□□□□ 0.6
SFSWAP-207ENST00000538548 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
SFSWAP-207ENST00000538548 TMEM181Q9P2C4 612 aa18.82■□□□□ 0.6
SFSWAP-207ENST00000538548 KIAA1257Q9ULG3 409 aa18.82■□□□□ 0.6
SFSWAP-207ENST00000538548 IQCA1LA6NCM1 817 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 NOL3O60936 208 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 SEC24DO94855 1032 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 CXCL8P10145 99 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 PMF1Q6P1K2 205 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 OR52K1Q8NGK4 314 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 HMGCLL1Q8TB92 370 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 ACDQ96AP0 544 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 CNDP2Q96KP4 475 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 CEP41Q9BYV8 373 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 ADAMTS10Q9H324 1103 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC39A10Q9ULF5 831 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 CFAP99D6REC4 459 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 VWA5AO00534 786 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 MAFO75444 373 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 NFICP08651 508 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 PTPN9P43378 593 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 GLUD2P49448 558 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 NDST1P52848 882 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 FSTL1Q12841 308 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 GRSF1Q12849 480 aaKnown RBP eCLIP18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 SQLEQ14534 574 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 HSDL1Q3SXM5 330 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 EGFLAMQ63HQ2 1017 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 AFG1LQ8WV93 481 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 SCYL1Q96KG9 808 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 PTPRHQ9HD43 1115 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 CD320Q9NPF0 282 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 BFARQ9NZS9 450 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 USP3Q9Y6I4 520 aa18.81■□□□□ 0.6
SFSWAP-207ENST00000538548 TMEM233B4DJY2 109 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 J3QRK9 145 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 ATICP31939 592 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 CXCL9Q07325 125 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 IFRD2Q12894 506 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 NFATC3Q12968 1075 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 FASTKQ14296 549 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 CCDC80Q76M96 950 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SCUBE3Q8IX30 993 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 TMEM130Q8N3G9 435 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SCAIQ8N9R8 606 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 FBXL8Q96CD0 374 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 TUBA1CQ9BQE3 449 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 NAA50Q9GZZ1 169 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 RPF1Q9H9Y2 349 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 NRBP2Q9NSY0 501 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 CCM2LQ9NUG4 571 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 TARM1B6A8C7 271 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 C7P10643 843 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 GOT1P17174 413 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 GRIA3P42263 894 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 GLRBP48167 497 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 ATXN1P54253 815 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 GOLGA7BQ2TAP0 167 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 FAM45BPQ6NSW5 357 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 ABRAXAS1Q6UWZ7 409 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 EPHX4Q8IUS5 362 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC15A4Q8N697 577 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 NLGN2Q8NFZ4 835 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 FAM45AQ8TCE6 357 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SEPT8Q92599 483 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 GPR22Q99680 433 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 C1orf50Q9BV19 199 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SEPT10Q9P0V9 454 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 CROTQ9UKG9 612 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 SNX9Q9Y5X1 595 aa18.8■□□□□ 0.6
SFSWAP-207ENST00000538548 TRIP11Q15643 1979 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 SSC5DA1L4H1 1573 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 CCDC162PA2VCL2 907 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 MFSD11O43934 449 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 DLX3O60479 287 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 EIF2B2P49770 351 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 RPS3AP61247 264 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 MPP1Q00013 466 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 HACD2Q6Y1H2 254 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 KCTD8Q6ZWB6 473 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 TMEM110Q86TL2 294 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 KCNMB4Q86W47 210 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 ZNF567Q8N184 647 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 FSTL5Q8N475 847 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 RNF149Q8NC42 400 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 CENPIQ92674 756 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 HEPHQ9BQS7 1158 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 CORINQ9Y5Q5 1042 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 GPC6Q9Y625 555 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 MRASO14807 208 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 NPHS1O60500 1241 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 SRP72O76094 671 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 ZNF182P17025 639 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 CCNA2P20248 432 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 ARL4AP40617 200 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms