RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SLC35F3Q8IY50 421 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 OR6K2Q8NGY2 324 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 TPCN2Q8NHX9 752 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 KLF6Q99612 283 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 WDCPQ9H6R7 721 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 ARHGEF38Q9NXL2 777 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 APOBEC3BQ9UH17 382 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 GGT7Q9UJ14 662 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 SALL4Q9UJQ4 1053 aa14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 FCF1Q9Y324 198 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 HEMK1Q9Y5R4 338 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-206ENST00000538456 CCDC187A0A096LP49 1063 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 GCATO75600 419 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 L1CAMP32004 1257 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 GKP32189 559 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 NOS2P35228 1153 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 RPIAP49247 311 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 SULT1E1P49888 294 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 SERPINH1P50454 418 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 THOP1P52888 689 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 ADKP55263 362 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 TCEA2Q15560 299 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 PTPN20Q4JDL3 420 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 BRMS1LQ5PSV4 323 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 C6orf132Q5T0Z8 1188 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 RETSATQ6NUM9 610 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 ENOSF1Q7L5Y1 443 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC26A9Q7LBE3 791 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 CLEC14AQ86T13 490 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 GLMNQ92990 594 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 CCNL2Q96S94 520 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 CCDC3Q9BQI4 270 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 HEPHQ9BQS7 1158 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 LRRC61Q9BV99 259 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 BOCQ9BWV1 1114 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 C1QTNF2Q9BXJ5 285 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 TM6SF2Q9BZW4 377 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 FAM117AQ9C073 453 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 ATP13A1Q9HD20 1204 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 PLCB1Q9NQ66 1216 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 SPASTQ9UBP0 616 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 HOOK1Q9UJC3 728 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 ACTL7AQ9Y615 435 aa14.26□□□□□ -0.13
SMARCA4-206ENST00000538456 BICDL2A1A5D9 508 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 DRGXA6NNA5 263 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 TPP1O14773 563 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 AP1G1O43747 822 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 SRGAP2O75044 1071 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PPP1R2P41236 205 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 ABL2P42684 1182 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 CXCR3P49682 368 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PFN3P60673 137 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 ARF5P84085 180 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 DEUP1Q05D60 604 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 ARL13BQ3SXY8 428 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 CARD16Q5EG05 197 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 JAMLQ86YT9 394 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 RYBPQ8N488 228 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PCDH20Q8N6Y1 951 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 EXD3Q8N9H8 876 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 BTN2A2Q8WVV5 523 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 NAT6Q93015 286 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 NPY6RQ99463 290 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 CEP44Q9C0F1 390 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 EPB41L5Q9HCM4 733 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 ATXN7L1Q9ULK2 861 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PNMA8BQ9ULN7 279 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 PCDHGC3Q9UN70 934 aa14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 TLN1Q9Y490 2541 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-206ENST00000538456 C16orf96A6NNT2 1141 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 BIN1O00499 593 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 TSPAN6O43657 245 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 ZMPSTE24O75844 475 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 GNA14O95837 355 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 ANXA6P08133 673 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC9A1P19634 815 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 BMP6P22004 513 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 CSRP3P50461 194 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 NFKB2Q00653 900 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 LRRC73Q5JTD7 316 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 FAXCQ5TGI0 409 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 B3GNT8Q7Z7M8 397 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 DRC7Q8IY82 874 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 LENG8Q96PV6 779 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 TBCBQ99426 244 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 SRRTQ9BXP5 876 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 SLC13A1Q9BZW2 595 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 SIRPGQ9P1W8 387 aa14.24□□□□□ -0.13
SMARCA4-206ENST00000538456 HECAQ9UBI9 543 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms