RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ATP11CQ8NB49 1132 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 IPMKQ8NFU5 416 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 PYROXD1Q8WU10 500 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 FGF14Q92915 247 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
DDB1-209ENST00000537877 TRMT61BQ9BVS5 477 aaKnown RBP12.52□□□□□ -0.41
DDB1-209ENST00000537877 PLA2G2FQ9BZM2 168 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 EPB41L4BQ9H329 900 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 UBP1Q9NZI7 540 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 TEX264Q9Y6I9 313 aa12.52□□□□□ -0.41
DDB1-209ENST00000537877 MYOFQ9NZM1 2061 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 INSIG1O15503 277 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 MBTPS2O43462 519 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 TULP3O75386 442 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 PMPCBO75439 489 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 CISD3P0C7P0 127 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 KCNA5P22460 613 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 GRIA1P42261 906 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 MAPK8P45983 427 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 CSNK1DP48730 415 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 NPY2RP49146 381 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 AP1S1P61966 158 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 GRAMD4Q6IC98 578 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 ADIPOR2Q86V24 386 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 IQCKQ8N0W5 287 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDB1-209ENST00000537877 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 OR52K1Q8NGK4 314 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 ISG20Q96AZ6 181 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 PKNOX2Q96KN3 472 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 MRGPRX2Q96LB1 330 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 SIGLEC10Q96LC7 697 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 WDR83Q9BRX9 315 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 FICDQ9BVA6 458 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 BFARQ9NZS9 450 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 DEC1Q9P2X7 70 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 PLAAQ9Y263 795 aa12.51□□□□□ -0.41
DDB1-209ENST00000537877 FCF1Q9Y324 198 aaKnown RBP12.51□□□□□ -0.41
DDB1-209ENST00000537877 MIA3Q5JRA6 1907 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 SDR42E2A6NKP2 422 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
DDB1-209ENST00000537877 AVILO75366 819 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 BANF1O75531 89 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 ACSL3O95573 720 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 IGSF6O95976 241 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 MT-CO1P00395 513 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 CPP00450 1065 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 EPOP01588 193 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 GSTA2P09210 222 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 SRCP12931 536 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 FOSL2P15408 326 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 HLA-DPA1P20036 260 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 CA4P22748 312 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 GDI1P31150 447 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 PHBP35232 272 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 ELK3P41970 407 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 RGRP47804 291 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 ECT2LQ008S8 904 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 SLC29A2Q14542 456 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
DDB1-209ENST00000537877 KYNUQ16719 465 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 ITPRIPL2Q3MIP1 535 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
DDB1-209ENST00000537877 C22orf39Q6P5X5 142 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 RANBP10Q6VN20 620 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 C12orf40Q86WS4 652 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 PCDH20Q8N6Y1 951 aaKnown RBP12.5□□□□□ -0.41
DDB1-209ENST00000537877 ZIM3Q96PE6 472 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 EBNA1BP2Q99848 306 aaKnown RBP12.5□□□□□ -0.41
DDB1-209ENST00000537877 IL22Q9GZX6 179 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 NUMBLQ9Y6R0 609 aa12.5□□□□□ -0.41
DDB1-209ENST00000537877 A0A087WUV0 522 aaPredicted RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 ARNTLO00327 626 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 USP12O75317 370 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 GSRP00390 522 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 FGF1P05230 155 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms