RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 AMZ1Q400G9 498 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 TTC39BQ5VTQ0 682 aaPredicted RBP9.35□□□□□ -0.91
USP28-205ENST00000537706 CEACAM20Q6UY09 585 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 CHSY1Q86X52 802 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 FAM129CQ86XR2 697 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 ESX1Q8N693 406 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 GPR156Q8NFN8 814 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 CCDC74BQ96LY2 380 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 ZMYND15Q9H091 742 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 MRPL40Q9NQ50 206 aaKnown RBP9.35□□□□□ -0.91
USP28-205ENST00000537706 PILRAQ9UKJ1 303 aa9.35□□□□□ -0.91
USP28-205ENST00000537706 AP1G1O43747 822 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 NUDT21O43809 227 aaKnown RBP9.34□□□□□ -0.91
USP28-205ENST00000537706 FAM155BO75949 473 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 APOEP02649 317 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 DRD2P14416 443 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 HK3P52790 923 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 ANAPC15P60006 121 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 KRT83P78385 493 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 NR6A1Q15406 480 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 NADK2Q4G0N4 442 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 C14orf28Q4W4Y0 310 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 RABGAP1LQ5R372 815 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 NADSYN1Q6IA69 706 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 DNAJC19Q96DA6 116 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 SERPINB11Q96P15 392 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 TWNKQ96RR1 684 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 SLC25A23Q9BV35 468 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 MFRPQ9BY79 579 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
USP28-205ENST00000537706 AGPAT3Q9NRZ7 376 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
USP28-205ENST00000537706 HESX1Q9UBX0 185 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 IL36AQ9UHA7 158 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 ZNF451Q9Y4E5 1061 aa9.34□□□□□ -0.91
USP28-205ENST00000537706 RELNP78509 3460 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RHPN2P1A8MT19 583 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 F5H5T6 163 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 EXOC3O60645 756 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 CD2BP2O95400 341 aaKnown RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 TNFP01375 233 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ADRB3P13945 408 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 CD58P19256 250 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 EIF4A3P38919 411 aaKnown RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 ASPAP45381 313 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 HDAC4P56524 1084 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 TAF8Q7Z7C8 310 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 UNC5BQ8IZJ1 945 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 SH2D3CQ8N5H7 860 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ANKRD52Q8NB46 1076 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RCBTB1Q8NDN9 531 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 KIAA1524Q8TCG1 905 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RRN3Q9NYV6 651 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 SLC12A6Q9UHW9 1150 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 PCDHGB7Q9Y5F8 929 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 FADS3Q9Y5Q0 445 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 PCNX1Q96RV3 2341 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ESPL1Q14674 2120 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RP1P56715 2156 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 IGHV5-10-1A0A0J9YXX1 117 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 CDC14CA4D256 554 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ANKUB1A6NFN9 424 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 IGLON5A6NGN9 336 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 XPO1O14980 1071 aaKnown RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 CLIC2O15247 247 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 MOCS2O96007 188 aaPredicted RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 TACR2P21452 398 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 PEX5P50542 639 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 MAP7Q14244 749 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
USP28-205ENST00000537706 ATP11CQ8NB49 1132 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 FAM46DQ8NEK8 389 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 GRIN3AQ8TCU5 1115 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 ARHGEF26Q96DR7 871 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 LRRC27Q9C0I9 530 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 RDH14Q9HBH5 336 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 CNGB3Q9NQW8 809 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 VPS28Q9UK41 221 aa9.33□□□□□ -0.92
USP28-205ENST00000537706 BOD1L1Q8NFC6 3051 aa9.32□□□□□ -0.92
USP28-205ENST00000537706 UTP20O75691 2785 aaKnown RBP9.32□□□□□ -0.92
USP28-205ENST00000537706 FRMD3A2A2Y4 597 aa9.32□□□□□ -0.92
USP28-205ENST00000537706 TCAF2A6NFQ2 919 aa9.32□□□□□ -0.92
USP28-205ENST00000537706 YJEFN3A6XGL0 299 aa9.32□□□□□ -0.92
USP28-205ENST00000537706 E7ENQ6 273 aa9.32□□□□□ -0.92
USP28-205ENST00000537706 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
USP28-205ENST00000537706 CTSLP07711 333 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms