RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GYPCP04921 128 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 SERPING1P05155 500 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 CDK4P11802 303 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 RXRGP48443 463 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 SEMG2Q02383 582 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 FBXL19Q6PCT2 694 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 TMC6Q7Z403 805 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 ARFGAP1Q8N6T3 406 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 MFSD2AQ8NA29 543 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 NXPE2Q96DL1 559 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 ERVMER34-1Q9H9K5 563 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 IFNKQ9P0W0 207 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 LUC7L2Q9Y383 392 aaKnown RBP12.69□□□□□ -0.38
PRKDC-207ENST00000536483 AK5Q9Y6K8 562 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 DOCK4Q8N1I0 1966 aa12.69□□□□□ -0.38
PRKDC-207ENST00000536483 ARID1BQ8NFD5 2236 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 SMAD6O43541 496 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 PLRG1O43660 514 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 SKILP12757 684 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 DESP17661 470 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 NUDT1P36639 197 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 EIF2S3P41091 472 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 SERPINH1P50454 418 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ZNF135P52742 658 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 GEMIN4P57678 1058 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 YBEYP58557 167 aaPredicted RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ARF5P84085 180 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 Q6ZVU0 165 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 KANSL1Q7Z3B3 1105 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 UMODL1-AS1Q8N2C9 162 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 OXR1Q8N573 874 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ATP11CQ8NB49 1132 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 VOPP1Q96AW1 172 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 NOL6Q9H6R4 1146 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 MRPL47Q9HD33 250 aaKnown RBP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 NENFQ9UMX5 172 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRKDC-207ENST00000536483 SCINQ9Y6U3 715 aa12.68□□□□□ -0.38
PRKDC-207ENST00000536483 ZSCAN5CA6NGD5 496 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 K7ERQ8 282 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 FGF10O15520 208 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 KDELR3O43731 214 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 SDC3O75056 442 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 TPM3P06753 285 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CKMT2P17540 419 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CHRNA3P32297 505 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 PCK1P35558 622 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 HCAR3P49019 387 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 STAT4Q14765 748 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 RTP5Q14D33 572 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 NEK5Q6P3R8 708 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 C22orf39Q6P5X5 142 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 IQCHQ86VS3 1027 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 PYROXD2Q8N2H3 581 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CASKIN2Q8WXE0 1202 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 EPAS1Q99814 870 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 HDAC8Q9BY41 377 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 NRSN2Q9GZP1 204 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 ATP13A1Q9HD20 1204 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CNOT8Q9UFF9 292 aaKnown RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 DMTF1Q9Y222 760 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CA5BQ9Y2D0 317 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-207ENST00000536483 CHD5Q8TDI0 1954 aa12.67□□□□□ -0.38
PRKDC-207ENST00000536483 GCN1Q92616 2671 aaKnown RBP12.66□□□□□ -0.38
PRKDC-207ENST00000536483 TMCO5BA8MYB1 307 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 BNIP3LO60238 219 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 MAGEC1O60732 1142 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 RAMP2O60895 175 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 PRNPP04156 253 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 PRB1P04280 392 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 CYP1A2P05177 515 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 CTSLP07711 333 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 GLDCP23378 1020 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 PSMA2P25787 234 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 EPHB2P29323 1055 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 ACVRL1P37023 503 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
PRKDC-207ENST00000536483 OVGP1Q12889 678 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms