RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CLEC14AQ86T13 490 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 SETD3Q86TU7 594 aaPredicted RBP8.19□□□□□ -1.1
CHFR-211ENST00000535897 SLC35F3Q8IY50 421 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 OR7D4Q8NG98 312 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 OR6K2Q8NGY2 324 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 WDR48Q8TAF3 677 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
CHFR-211ENST00000535897 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
CHFR-211ENST00000535897 HEPHQ9BQS7 1158 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 SLC13A1Q9BZW2 595 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 STRADBQ9C0K7 418 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 ATP13A1Q9HD20 1204 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 GPR27Q9NS67 375 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 PIGVQ9NUD9 493 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 ASNSD1Q9NWL6 643 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 MPP6Q9NZW5 540 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 GULP1Q9UBP9 304 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 ATXN7L1Q9ULK2 861 aaPredicted RBP8.19□□□□□ -1.1
CHFR-211ENST00000535897 PADI4Q9UM07 663 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 CNTN6Q9UQ52 1028 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 CTNND2Q9UQB3 1225 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 ITM2BQ9Y287 266 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 FADS3Q9Y5Q0 445 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 SNX10Q9Y5X0 201 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 RP1P56715 2156 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 LRRK2Q5S007 2527 aa8.19□□□□□ -1.1
CHFR-211ENST00000535897 BICDL2A1A5D9 508 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 KRIT1O00522 736 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 PLD2O14939 933 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SPINT1O43278 529 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 TSPAN6O43657 245 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 GCATO75600 419 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 GNA14O95837 355 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 ERBB2P04626 1255 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 JMJD7P0C870 316 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SLC5A2P31639 672 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 NOS2P35228 1153 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 KRT9P35527 623 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 PPP1R2P41236 205 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 NFKB2Q00653 900 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SLC6A3Q01959 620 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 DEUP1Q05D60 604 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 EIF2B5Q13144 721 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 TGIF1Q15583 401 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 C5orf22Q49AR2 442 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 CARD16Q5EG05 197 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 BRMS1LQ5PSV4 323 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 GJB7Q6PEY0 223 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 OLFML1Q6UWY5 402 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 ATG14Q6ZNE5 492 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 RAB11FIP2Q7L804 512 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 VPS36Q86VN1 386 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 ZSCAN30Q86W11 494 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 CREBRFQ8IUR6 639 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 TRIM59Q8IWR1 403 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 DRC7Q8IY82 874 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 FBXO39Q8N4B4 442 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 PCDH20Q8N6Y1 951 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 EXD3Q8N9H8 876 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 C1orf131Q8NDD1 294 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 NELFBQ8WX92 580 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SCG3Q8WXD2 468 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 EXTL1Q92935 676 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 GFM1Q96RP9 751 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 KLF6Q99612 283 aaPredicted RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 LRRC61Q9BV99 259 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 BOCQ9BWV1 1114 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SRRTQ9BXP5 876 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 FOXP3Q9BZS1 431 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 TM6SF2Q9BZW4 377 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 TCEAL2Q9H3H9 227 aaPredicted RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHFR-211ENST00000535897 SIRPGQ9P1W8 387 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 HECAQ9UBI9 543 aaPredicted RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 PISDQ9UG56 409 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 IL17BQ9UHF5 180 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 GGT7Q9UJ14 662 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 STAP1Q9ULZ2 295 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
CHFR-211ENST00000535897 ZDHHC9Q9Y397 364 aa8.18□□□□□ -1.1
CHFR-211ENST00000535897 FAM170AA1A519 330 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 C16orf96A6NNT2 1141 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 LMO7DNF2Z398 122 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 YY2O15391 372 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 AP1G1O43747 822 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 RPLP0P05388 317 aaKnown RBP8.17□□□□□ -1.1
CHFR-211ENST00000535897 UGT2B4P06133 528 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 FAM87AP0C7U9 286 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 CTSEP14091 401 aa8.17□□□□□ -1.1
CHFR-211ENST00000535897 HGFP14210 728 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms