RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SEMA5BQ9P283 1151 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 LPAR3Q9UBY5 353 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 GDAQ9Y2T3 454 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 TMEM98Q9Y2Y6 226 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 COX11Q9Y6N1 276 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ZNF804BA4D1E1 1349 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 RTL9Q8NET4 1388 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 ABCC12Q96J65 1359 aa3.59□□□□□ -1.83
SNHG1-202ENST00000535689 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 MYH3P11055 1940 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 KRT38O76015 456 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 TUBB4AP04350 444 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 IGFBP2P18065 325 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PRKAR2BP31323 418 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PSMC2P35998 433 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 CCT4P50991 539 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PLCD1P51178 756 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PSG6Q00889 435 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 DEUP1Q05D60 604 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PPATQ06203 517 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 AIMP1Q12904 312 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 FOXF2Q12947 444 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 THOC5Q13769 683 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 NCAPH2Q6IBW4 605 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 JMJD6Q6NYC1 403 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 FBXO42Q6P3S6 717 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 SYCE2Q6PIF2 218 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 C17orf99Q6UX52 265 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 Q7L0L9 218 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 LRRC8DQ7L1W4 858 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 MCM10Q7L590 875 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 FASTKD5Q7L8L6 764 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 RD3Q7Z3Z2 195 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 ANKRD23Q86SG2 305 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 Q8N1X5 172 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 TEX19Q8NA77 164 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 CCDC191Q8NCU4 936 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 CEP70Q8NHQ1 597 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 SCAMP5Q8TAC9 235 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 NPIPB3Q92617 1050 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PIGKQ92643 395 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 CELF1Q92879 486 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 CLMNQ96JQ2 1002 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 FSCN3Q9NQT6 498 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 HYPKQ9NX55 129 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PPP1R14DQ9NXH3 145 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 TMOD2Q9NZR1 351 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 SCAF8Q9UPN6 1271 aaKnown RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
SNHG1-202ENST00000535689 ASTN2O75129 1339 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-202ENST00000535689 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 LAMA2P24043 3122 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 CCDC189A1A4V9 331 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 LINC01548A6NM66 108 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PRRT4C9JH25 899 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 SMIM22K7EJ46 135 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 EIF3FO00303 357 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 CXCL11O14625 94 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TSPAN4O14817 238 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 INPPL1O15357 1258 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 STRNO43815 780 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 HBP1O60381 514 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 METTL18O95568 372 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DDX58O95786 925 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 CNPP09543 421 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ALADP13716 330 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 FOSL2P15408 326 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 KRT4P19013 534 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 RXRAP19793 462 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 BMP5P22003 454 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PROZP22891 400 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 FPR3P25089 353 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ITPKBP27987 946 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 NDUFS1P28331 727 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 KRT9P35527 623 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PGM1P36871 562 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 SKIV2L2P42285 1042 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 AGTR2P50052 363 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TAS2R50P59544 299 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 RPS13P62277 151 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 RAE1P78406 368 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 MRPS5P82675 430 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 LMOD3Q0VAK6 560 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 KLF10Q13118 480 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 MAPK7Q13164 816 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 PPIL2Q13356 520 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 CUL4BQ13620 913 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 FHL3Q13643 280 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 DCTN1Q14203 1278 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ZNF268Q14587 947 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TAF5Q15542 800 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 SMN1Q16637 294 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 TUBB8Q3ZCM7 444 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 INTS11Q5TA45 600 aaKnown RBP3.57□□□□□ -1.84
SNHG1-202ENST00000535689 MAP3K21Q5TCX8 1036 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 LIPMQ5VYY2 423 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 ISM2Q6H9L7 571 aa3.57□□□□□ -1.84
SNHG1-202ENST00000535689 LRIG3Q6UXM1 1119 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms