RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 LRRC6Q86X45 466 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 BBS7Q8IWZ6 715 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CYP4X1Q8N118 509 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 IPMKQ8NFU5 416 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 SH3RF2Q8TEC5 729 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 DCAKDQ8WVC6 231 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 TTC17Q96AE7 1141 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 TADA1Q96BN2 335 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 ZNF707Q96C28 371 aaPredicted RBP17.31■□□□□ 0.36
VPS51-216ENST00000534591 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 FICDQ9BVA6 458 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 FSD1LQ9BXM9 530 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 POLR1EQ9GZS1 481 aaKnown RBP17.31■□□□□ 0.36
VPS51-216ENST00000534591 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 ARNT2Q9HBZ2 717 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 TBK1Q9UHD2 729 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 FAM237BA0A1B0GVD1 139 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 FAM159BA6NKW6 160 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 PMPCBO75439 489 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 C1QAP02745 245 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 INHBAP08476 426 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 TCF3P15923 654 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CES1P23141 567 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 ATP1A2P50993 1020 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 WNT3AP56704 352 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CRADDP78560 199 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 NIPAL4Q0D2K0 466 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 NAB1Q13506 487 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 OLIG2Q13516 323 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 EFTUD2Q15029 972 aaKnown RBP eCLIP17.31■□□□□ 0.36
VPS51-216ENST00000534591 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 RNF43Q68DV7 783 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 RANBP10Q6VN20 620 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 SLC26A11Q86WA9 606 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 ARRDC2Q8TBH0 407 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 MRGPRX2Q96LB1 330 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CDCA3Q99618 268 aaPredicted RBP17.31■□□□□ 0.36
VPS51-216ENST00000534591 APOL2Q9BQE5 337 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 CAPS2Q9BXY5 557 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 PIH1D1Q9NWS0 290 aaKnown RBP17.31■□□□□ 0.36
VPS51-216ENST00000534591 ZNF180Q9UJW8 692 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 DENND4AQ7Z401 1863 aa17.31■□□□□ 0.36
VPS51-216ENST00000534591 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 SHOX2O60902 331 aaPredicted RBP17.3■□□□□ 0.36
VPS51-216ENST00000534591 CYBBP04839 570 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 DSC2Q02487 901 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 CDH18Q13634 790 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 CRYMQ14894 314 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 DENND5AQ6IQ26 1287 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 POTEHQ6S545 545 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 GRASPQ7Z6J2 395 aaPredicted RBP17.3■□□□□ 0.36
VPS51-216ENST00000534591 TMEM135Q86UB9 458 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 TRABD2AQ86V40 505 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 PGBD5Q8N414 524 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS51-216ENST00000534591 DDI1Q8WTU0 396 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 PTCD2Q8WV60 388 aaKnown RBP17.3■□□□□ 0.36
VPS51-216ENST00000534591 USP13Q92995 863 aaPredicted RBP17.3■□□□□ 0.36
VPS51-216ENST00000534591 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 MGME1Q9BQP7 344 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 CINPQ9BW66 212 aaPredicted RBP17.3■□□□□ 0.36
VPS51-216ENST00000534591 CD320Q9NPF0 282 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 SOX13Q9UN79 622 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 DOCK6Q96HP0 2047 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 NOTCH4Q99466 2003 aa17.3■□□□□ 0.36
VPS51-216ENST00000534591 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 SCAMP3O14828 347 aaKnown RBP17.29■□□□□ 0.36
VPS51-216ENST00000534591 USP1O94782 785 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 MMP2P08253 660 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 KRT15P19012 456 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 MDH1P40925 334 aaKnown RBP17.29■□□□□ 0.36
VPS51-216ENST00000534591 CD86P42081 329 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 MAXP61244 160 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 NTHL1P78549 312 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 LGSNQ5TDP6 509 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 MFN1Q8IWA4 741 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 CTAGE3PQ8IX95 158 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 PPM1NQ8N819 430 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
VPS51-216ENST00000534591 CDKL2Q92772 493 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 FEM1AQ9BSK4 669 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 KIFC1Q9BW19 673 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 PIDD1Q9HB75 910 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 TBC1D14Q9P2M4 693 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 RPS6KL1Q9Y6S9 549 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 FAM169AQ9Y6X4 670 aa17.29■□□□□ 0.36
VPS51-216ENST00000534591 CBX4O00257 560 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 MBTPS2O43462 519 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 WEE1P30291 646 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 MGAT5Q09328 741 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 ANKRD20A4Q4UJ75 823 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 PCID2Q5JVF3 399 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 TRMT10BQ6PF06 316 aaKnown RBP17.28■□□□□ 0.36
VPS51-216ENST00000534591 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
VPS51-216ENST00000534591 SRRM1Q8IYB3 904 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms