RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	NCF4	Q15080	339 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZNF621	Q6ZSS3	439 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	STRADA	Q7RTN6	431 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	BRI3BP	Q8WY22	251 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	NSMCE2	Q96MF7	247 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ACBD6	Q9BR61	282 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZFP14	Q9HCL3	533 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZNF232	Q9UNY5	417 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SLC45A1	Q9Y2W3	748 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SNX13	Q9Y5W8	968 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PTPRJ	Q12913	1337 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MRC1	P22897	1456 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	BAZ2B	Q9UIF8	2168 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ACR	P10323	421 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PLK1	P53350	603 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KCNMA1	Q12791	1236 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SHROOM1	Q2M3G4	852 aa	Predicted RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RPAIN	Q86UA6	219 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	IRGQ	Q8WZA9	623 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PROX1	Q92786	737 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CLIP3	Q96DZ5	547 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CATSPER2	Q96P56	530 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ACP6	Q9NPH0	428 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TMPRSS4	Q9NRS4	437 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CHST7	Q9NS84	486 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TRMT13	Q9NUP7	481 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ENOPH1	Q9UHY7	261 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	OR10H1	Q9Y4A9	318 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PHGDH	O43175	533 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PRMT3	O60678	531 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CCNDBP1	O95273	360 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	C1R	P00736	705 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CALCA	P01258	141 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CCND1	P24385	295 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TRAF2	Q12933	501 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	BIK	Q13323	160 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RASA2	Q15283	850 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FAM98B	Q52LJ0	330 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	BHLHB9	Q6PI77	547 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KYAT3	Q6YP21	454 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RBFA	Q8N0V3	343 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KREMEN2	Q8NCW0	462 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FLCN	Q8NFG4	579 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	C2orf15	Q8WU43	125 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	LENG1	Q96BZ8	264 aa	Predicted RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZBTB10	Q96DT7	871 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	LHX5	Q9H2C1	402 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	POLM	Q9NP87	494 aa	Predicted RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	NINJ2	Q9NZG7	142 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	DMGDH	Q9UI17	866 aa	Known RBP	15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	AP3M1	Q9Y2T2	418 aa		15.89	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CCDC159	P0C7I6	412 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CALB2	P22676	271 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RPL3	P39023	403 aa	Known RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PARP15	Q460N3	678 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ADAMTSL2	Q86TH1	951 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ALG9	Q9H6U8	611 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ZNF229	Q9UJW7	825 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KCNE2	Q9Y6J6	123 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	C15orf38-AP3S2	A0A0A6YYH1	394 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	AVIL	O75366	819 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MAX	P61244	160 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MRPS15	P82914	257 aa	Known RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FMO1	Q01740	532 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MEA1	Q16626	185 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	LCLAT1	Q6UWP7	414 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ARPIN	Q7Z6K5	226 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CTU1	Q7Z7A3	348 aa	Known RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SIKE1	Q9BRV8	207 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ADI1	Q9BV57	179 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SEMA4B	Q9NPR2	832 aa	Predicted RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CROT	Q9UKG9	612 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ATRN	O75882	1429 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	LRRC10B	A6NIK2	292 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ARVCF	O00192	962 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	INPP4B	O15327	924 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	GRSF1	Q12849	480 aa	Known RBP eCLIP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ABR	Q12979	859 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	GPM6B	Q13491	265 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PFKFB4	Q16877	469 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KY	Q8NBH2	561 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	TCP10L	Q8TDR4	215 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FIG4	Q92562	907 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	DTNBP1	Q96EV8	351 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	GPR88	Q9GZN0	384 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FBXO6	Q9NRD1	293 aa	Predicted RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ROBO3	Q96MS0	1386 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	KLRC4	O43908	158 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PSMD8	P48556	350 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	SLC5A3	P53794	718 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ST3GAL1	Q11201	340 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	FASTK	Q14296	549 aa	Known RBP	15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RIPOR1	Q6ZS17	1223 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	RBPJL	Q9UBG7	517 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	MORF4L1	Q9UBU8	362 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	PCDHGA4	Q9Y5G9	962 aa		15.88	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ARL5C	A6NH57	179 aa		15.87	■□□□□ 0.13
NCAPD3-213	ENST00000534532	ARL2	P36404	184 aa		15.87	■□□□□ 0.13
NCAPD3-213	ENST00000534532	WAS	P42768	502 aa		15.87	■□□□□ 0.13
NCAPD3-213	ENST00000534532	CLCNKB	P51801	687 aa		15.87	■□□□□ 0.13

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms