RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GKP32189 559 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 MAMLD1Q13495 774 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 MYLK3Q32MK0 819 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 ZNF805Q5CZA5 627 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 DHRS13Q6UX07 377 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 PARS2Q7L3T8 475 aaKnown RBP15.7■□□□□ 0.1
CPSF1-211ENST00000533492 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 RAB7BQ96AH8 199 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 CALN1Q9BXU9 219 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 HAUS4Q9H6D7 363 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 FADS3Q9Y5Q0 445 aa15.7■□□□□ 0.1
CPSF1-211ENST00000533492 PTPRBP23467 1997 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 CHD5Q8TDI0 1954 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 PLXNB3Q9ULL4 1909 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 SRRM3A6NNA2 597 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-211ENST00000533492 C16orf96A6NNT2 1141 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 RASA4BC9J798 803 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 RASA4O43374 803 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 AP1G1O43747 822 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 SDC3O75056 442 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 RNF8O76064 485 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 UGT2B4P06133 528 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 CDK4P11802 303 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 CLDN2P57739 230 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 TPI1P60174 286 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 TPM4P67936 248 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 OGDHQ02218 1023 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 KLHL30Q0D2K2 578 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 DNAJC3Q13217 504 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 SGCGQ13326 291 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 TMEM259Q4ZIN3 620 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 HS1BP3Q53T59 392 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 FAM174AQ8TBP5 190 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 CASKIN2Q8WXE0 1202 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 KLHL32Q96NJ5 620 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
CPSF1-211ENST00000533492 SYT11Q9BT88 431 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 OSBPL1AQ9BXW6 950 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 CCDC86Q9H6F5 360 aaKnown RBP15.69■□□□□ 0.1
CPSF1-211ENST00000533492 KLHL11Q9NVR0 708 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 AIPL1Q9NZN9 384 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 PCDHGA1Q9Y5H4 931 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 HS3ST3A1Q9Y663 406 aa15.69■□□□□ 0.1
CPSF1-211ENST00000533492 A0A1B0GTH6 734 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 A6NNZ2 444 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 WASH4PA8MWX3 477 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 FGF10O15520 208 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 ATMINO43313 823 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 TSPAN6O43657 245 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 RFPL3O75679 317 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 TMCC1O94876 653 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 IGSF6O95976 241 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 FTLP02792 175 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 C1SP09871 688 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 GZMAP12544 262 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 HTR7P34969 479 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 RHOAP61586 193 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 PARP15Q460N3 678 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 INO80DQ53TQ3 878 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 ATXN7L2Q5T6C5 722 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 PLEKHA7Q6IQ23 1121 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 Q6ZSR6 202 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 ZNF571Q7Z3V5 609 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 DCP2Q8IU60 420 aaKnown RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 OR13H1Q8NG92 308 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 HMCESQ96FZ2 354 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 EDEM3Q9BZQ6 932 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 TTYH3Q9C0H2 523 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 DHX35Q9H5Z1 703 aaKnown RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 NOL6Q9H6R4 1146 aaKnown RBP15.68■□□□□ 0.1
CPSF1-211ENST00000533492 PCSK1NQ9UHG2 260 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 AP4E1Q9UPM8 1137 aa15.68■□□□□ 0.1
CPSF1-211ENST00000533492 KNTC1P50748 2209 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 COL5A1P20908 1838 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 FAM149AA5PLN7 773 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 DAPK3O43293 454 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 PRKCIP41743 596 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 SERINC3Q13530 473 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 NR1I3Q14994 352 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 IQCB1Q15051 598 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 SMAD1Q15797 465 aaKnown RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 ERMARDQ5T6L9 678 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 GCNT7Q6ZNI0 430 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 PTAR1Q7Z6K3 402 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 TMPRSS12Q86WS5 348 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 DNAAF5Q86Y56 855 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 UMODL1-AS1Q8N2C9 162 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 NETO2Q8NC67 525 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 KLC2Q9H0B6 622 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 GPATCH2LQ9NWQ4 482 aa15.67■□□□□ 0.1
CPSF1-211ENST00000533492 UBA2Q9UBT2 640 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 CNOT8Q9UFF9 292 aaKnown RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 IPO11Q9UI26 975 aaKnown RBP15.67■□□□□ 0.1
CPSF1-211ENST00000533492 TDRD6O60522 2096 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms