RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 HEPHQ9BQS7 1158 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 CEP41Q9BYV8 373 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 SLC25A51Q9H1U9 297 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 ZDHHC6Q9H6R6 413 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 LMAN1LQ9HAT1 526 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 VPS45Q9NRW7 570 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 CACNA2D2Q9NY47 1150 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 HECAQ9UBI9 543 aaPredicted RBP11.53□□□□□ -0.56
GMDS-210ENST00000533279 SIT1Q9Y3P8 196 aa11.53□□□□□ -0.56
GMDS-210ENST00000533279 COL4A2P08572 1712 aa11.52□□□□□ -0.56
GMDS-210ENST00000533279 NUP205Q92621 2012 aa11.52□□□□□ -0.56
GMDS-210ENST00000533279 KRBA1A5PL33 1030 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 EFCAB8A8MWE9 144 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 TTC34A8MYJ7 566 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 SMAPO00193 183 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 AP3B1O00203 1094 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 INSIG1O15503 277 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MT-CO1P00395 513 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 HLA-DQB2P05538 268 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ACADMP11310 421 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 NFKB1P19838 968 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
GMDS-210ENST00000533279 VPS41P49754 854 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 CCNHP51946 323 aaPredicted RBP11.52□□□□□ -0.57
GMDS-210ENST00000533279 EPHB1P54762 984 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 GPS1Q13098 491 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ZBTB17Q13105 803 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MPP3Q13368 585 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 PTK6Q13882 451 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 CCINQ13939 588 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 SLC14A2Q15849 920 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 PTPRNQ16849 979 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 TTC31Q49AM3 519 aaPredicted RBP11.52□□□□□ -0.57
GMDS-210ENST00000533279 TEX35Q5T0J7 233 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ZNF776Q68DI1 518 aaPredicted RBP11.52□□□□□ -0.57
GMDS-210ENST00000533279 PPP1R21Q6ZMI0 780 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 SRLQ86TD4 932 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 LINC00523Q86TU6 105 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 JAMLQ86YT9 394 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MMGT1Q8N4V1 131 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.52□□□□□ -0.57
GMDS-210ENST00000533279 TSEN2Q8NCE0 465 aaKnown RBP11.52□□□□□ -0.57
GMDS-210ENST00000533279 PJA1Q8NG27 643 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 CCDC110Q8TBZ0 833 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 EXOC2Q96KP1 924 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MRGPRX3Q96LB0 322 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ADGRE3Q9BY15 652 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 TNKS2Q9H2K2 1166 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 C10orf88Q9H8K7 445 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 LRRC40Q9H9A6 602 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.57
GMDS-210ENST00000533279 IL36AQ9UHA7 158 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 FAM153AQ9UHL3 310 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 SLCO3A1Q9UIG8 710 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MMP17Q9ULZ9 603 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 ATP8A1Q9Y2Q0 1164 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 MIA3Q5JRA6 1907 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 SHROOM3Q8TF72 1996 aa11.52□□□□□ -0.57
GMDS-210ENST00000533279 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 K7ERQ8 282 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 TTI1O43156 1089 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 SMAD6O43541 496 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 SOCS5O75159 536 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 MCM3P25205 808 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 PSMB4P28070 264 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 CD86P42081 329 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 IL12RB1P42701 662 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 WASP42768 502 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 KIR2DL1P43626 348 aaPredicted RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 RPS9P46781 194 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 DGKEP52429 567 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 MAXP61244 160 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 POLR2LP62875 67 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 WASHC5Q12768 1159 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 CYTH1Q15438 398 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 MYLK3Q32MK0 819 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 ATXN7L2Q5T6C5 722 aaPredicted RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 NAPEPLDQ6IQ20 393 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 TTC27Q6P3X3 843 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 TRIM67Q6ZTA4 783 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 GANCQ8TET4 914 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 PDCD6IPQ8WUM4 868 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 SNF8Q96H20 258 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 FCRL5Q96RD9 977 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 FOXQ1Q9C009 403 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 TMEM245Q9H330 911 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 FBRSL1Q9HCM7 1045 aaKnown RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
GMDS-210ENST00000533279 F5P12259 2224 aa11.51□□□□□ -0.57
GMDS-210ENST00000533279 SPTBN5Q9NRC6 3674 aaKnown RBP11.5□□□□□ -0.57
GMDS-210ENST00000533279 CHD5Q8TDI0 1954 aa11.5□□□□□ -0.57
GMDS-210ENST00000533279 COL6A3P12111 3177 aa11.5□□□□□ -0.57
GMDS-210ENST00000533279 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
GMDS-210ENST00000533279 CHURC1-FNTBB4DL54 471 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms