RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RRM1P23921 792 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC35F6Q8N357 371 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 KDM1BQ8NB78 822 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 STK32AQ8WU08 396 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC35F5Q8WV83 523 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 EXTL1Q92935 676 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ATXN7L3BQ96GX2 97 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 APOLD1Q96LR9 279 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 WDR24Q96S15 920 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MTG2Q9H4K7 406 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 NLGN3Q9NZ94 848 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 TULP2O00295 520 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 EFSO43281 561 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 ADH1BP00325 375 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 ASLP04424 464 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 FAM87AP0C7U9 286 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 RGS7P49802 495 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 PDCLQ13371 301 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 TRIP4Q15650 581 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 MPP7Q5T2T1 576 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 PMF1Q6P1K2 205 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 RHOT2Q8IXI1 618 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 MSANTD4Q8NCY6 345 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 WDR36Q8NI36 951 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 C18orf8Q96DM3 657 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 KLHDC7BQ96G42 594 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 PRR11Q96HE9 360 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 CPXM1Q96SM3 734 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 DUSP23Q9BVJ7 150 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 NUP85Q9BW27 656 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 WDR70Q9NW82 654 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 UCKL1Q9NWZ5 548 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 STOML2Q9UJZ1 356 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 MAN2B2Q9Y2E5 1009 aa11.59□□□□□ -0.55
TRAPPC4-213ENST00000533149 A0A1W2PNU3 283 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 CLEC18AA5D8T8 446 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 RNGTTO60942 597 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PALMO75781 387 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 GABBR2O75899 941 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 MTA2O94776 668 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 TNFSF15O95150 251 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 LATS1O95835 1130 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 ERBB2P04626 1255 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 THEGLP0DJG4 465 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 CASQ1P31415 396 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 GABRB2P47870 512 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PSMD8P48556 350 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC8A3P57103 927 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PPP2CBP62714 309 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PPP2CAP67775 309 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 MAMLD1Q13495 774 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 ADGRF1Q5T601 910 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 C9orf64Q5T6V5 341 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PLEKHA7Q6IQ23 1121 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 FOXR1Q6PIV2 292 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 RBM44Q6ZP01 1051 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 TMEM110Q86TL2 294 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 AADATQ8N5Z0 425 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 CLEC18CQ8NCF0 446 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 IFI44Q8TCB0 444 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 TTC17Q96AE7 1141 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 MYO19Q96H55 970 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 PSMG3-AS1Q96PY0 264 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC25A18Q9H1K4 315 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 NCKIPSDQ9NZQ3 722 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 UVRAGQ9P2Y5 699 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 ENTPD2Q9Y5L3 495 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 CAPN6Q9Y6Q1 641 aa11.58□□□□□ -0.56
TRAPPC4-213ENST00000533149 EDDM13A0A1B0GTR0 161 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 TCRBV5S1A1TA0A578 114 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 GRID2IPA4D2P6 1211 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 GOLGA8SH3BPF8 625 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 PIK3R2O00459 728 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC7A4O43246 635 aa11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 BUB1BO60566 1050 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-213ENST00000533149 TCEA3O75764 348 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms