RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 PTCRAQ6ISU1 281 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-208ENST00000533123 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-208ENST00000533123 ZNF783Q6ZMS7 281 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 C3orf62Q6ZUJ4 267 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 PID1Q7Z2X4 250 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 PALM2Q8IXS6 379 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 MCUQ8NE86 351 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 ZNF419Q96HQ0 510 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-208ENST00000533123 CCDC77Q9BR77 488 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 CAPS2Q9BXY5 557 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 PIH1D1Q9NWS0 290 aaKnown RBP18.79■□□□□ 0.6
SMPD1-208ENST00000533123 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
SMPD1-208ENST00000533123 POC1B-GALNT4F8VUJ3 575 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 SNAP91O60641 907 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 PEX11BO96011 259 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 FDFT1P37268 417 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 OXCT1P55809 520 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 RUNX3Q13761 415 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 C12orf40Q86WS4 652 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 MRRFQ96E11 262 aaKnown RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 AGAP3Q96P47 875 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 GORASP1Q9BQQ3 440 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 KIF26AQ9ULI4 1882 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 ZBTB24O43167 697 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 HOXC11O43248 304 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 KDELR3O43731 214 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 PRAMEF11O60813 436 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 ETFBP38117 255 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 GNGT1P63211 74 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 IL10RBQ08334 325 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 MPP5Q8N3R9 675 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 FBF1Q8TES7 1133 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 CFAP36Q96G28 342 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 LMLNQ96KR4 655 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 EURLQ9NYK6 297 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 RABGEF1Q9UJ41 708 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 INTS6Q9UL03 887 aaKnown RBP18.78■□□□□ 0.6
SMPD1-208ENST00000533123 MYO10Q9HD67 2058 aa18.78■□□□□ 0.6
SMPD1-208ENST00000533123 MTSS1O43312 755 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 CACNG3O60359 315 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 SHOX2O60902 331 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-208ENST00000533123 MAGEA3P43357 314 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 SLC10A7Q0GE19 358 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 OLIG2Q13516 323 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 AAK1Q2M2I8 961 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 PARP6Q2NL67 630 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 TEX44Q53QW1 395 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 MAFAQ8NHW3 353 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-208ENST00000533123 PDFQ9HBH1 243 aa18.77■□□□□ 0.6
SMPD1-208ENST00000533123 CDH16O75309 829 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 CD68P34810 354 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-208ENST00000533123 ARF5P84085 180 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 SPARCL1Q14515 664 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 GAB4Q2WGN9 574 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 PLEKHG6Q3KR16 790 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 LINGO4Q6UY18 593 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 EXOC3L1Q86VI1 746 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 CNTD1Q8N815 330 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 MDM1Q8TC05 714 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 XPO6Q96QU8 1125 aaKnown RBP18.77■□□□□ 0.59
SMPD1-208ENST00000533123 FRMD8Q9BZ67 464 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-208ENST00000533123 BRD9Q9H8M2 597 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 KCNK12Q9HB15 430 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 IGSF9Q9P2J2 1179 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 RSPH14Q9UHP6 348 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 GGA2Q9UJY4 613 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 TTLL3Q9Y4R7 772 aa18.77■□□□□ 0.59
SMPD1-208ENST00000533123 ARNTLO00327 626 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 TULP3O75386 442 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 IL9P15248 144 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 CREB1P16220 341 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 TMED2Q15363 201 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 CPA6Q8N4T0 437 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 MAML1Q92585 1016 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 SELENOSQ9BQE4 189 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 STMN4Q9H169 189 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 PLAC1Q9HBJ0 212 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 RBM22Q9NW64 420 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 LGALS13Q9UHV8 139 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 VPS51Q9UID3 782 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 FBXO10Q9UK96 956 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 ZMPSTE24O75844 475 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 PABPC1P11940 636 aaKnown RBP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 PHBP35232 272 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 SLC6A11P48066 632 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 NR1H3Q13133 447 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 HNRNPDQ14103 355 aaKnown RBP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 FUT11Q495W5 492 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 PITRM1Q5JRX3 1037 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 MARC1Q5VT66 337 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 ETFBKMTQ8IXQ9 262 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 PLCD3Q8N3E9 789 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 ARFGAP2Q8N6H7 521 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 DCAF4L2Q8NA75 395 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 NSMCE1Q8WV22 266 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 TEKT5Q96M29 485 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms