RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 HES5Q5TA89 166 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 OGFOD2Q6N063 350 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SYDE1Q6ZW31 735 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PLEKHH3Q7Z736 793 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 C8orf59Q8N0T1 100 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 EFCAB3Q8N7B9 438 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PLEKHO2Q8TD55 490 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PHF20Q9BVI0 1012 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 MED28Q9H204 178 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SENP2Q9HC62 589 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PNPLA8Q9NP80 782 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CHST12Q9NRB3 414 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 EIF3KQ9UBQ5 218 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 APEX2Q9UBZ4 518 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 DNAJC16Q9Y2G8 782 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 DUSP10Q9Y6W6 482 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 H3BSA7 217 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PDXKO00764 312 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 TBX1O43435 398 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 TSPAN19P0C672 248 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 GPR1P46091 355 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 BNIP3Q12983 259 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 BTBD16Q32M84 506 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SLC45A4Q5BKX6 768 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SPDYCQ5MJ68 293 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 ARMC8Q8IUR7 673 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SFRP1Q8N474 314 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 FAM47BQ8NA70 645 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 GALNT11Q8NCW6 608 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 DENND2DQ9H6A0 471 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PRMT7Q9NVM4 692 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CPA4Q9UI42 421 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 H3BMM5 538 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 FOXP2O15409 715 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 SLC16A3O15427 465 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 MYL4P12829 197 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CHRNB3Q05901 458 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 FGL2Q14314 439 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 DSC3Q14574 896 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 MIB1Q86YT6 1006 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CD302Q8IX05 232 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 LNX2Q8N448 690 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 RPRD1AQ96P16 312 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CDRT15Q96T59 188 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PI4K2AQ9BTU6 479 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 FUCA2Q9BTY2 467 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 CXorf21Q9HAI6 301 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 VPS45Q9NRW7 570 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 GDAP2Q9NXN4 497 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 MAT2BQ9NZL9 334 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 STARD13Q9Y3M8 1113 aa7.04□□□□□ -1.28
TGFBR3-210ENST00000533089 PARP4Q9UKK3 1724 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 F5H5T6 163 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CXCL11O14625 94 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 HAT1O14929 419 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 NARSO43776 548 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 ECDO95905 644 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 HLA-DRAP01903 254 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 PGK2P07205 417 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CLTBP09497 229 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CKBP12277 381 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 IGFBP4P22692 258 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 FDFT1P37268 417 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CDKL1Q00532 357 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 PDK1Q15118 436 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 KHDC1Q4VXA5 237 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 FAM92BQ6ZTR7 304 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 DPPA2Q7Z7J5 298 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 NT5DC4Q86YG4 428 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CLYBLQ8N0X4 340 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 MPP5Q8N3R9 675 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 KBTBD8Q8NFY9 601 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 MAGEE2Q8TD90 523 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 FBXO32Q969P5 355 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 ITPKCQ96DU7 683 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 CLIP3Q96DZ5 547 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 MTMR8Q96EF0 704 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 MED30Q96HR3 178 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 SEPHS2Q99611 448 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 GLIS2Q9BZE0 524 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 LIN28AQ9H9Z2 209 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 MANSC4A6NHS7 340 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 K7EPI3 171 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 SERPINA3P01011 423 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 GPD1P21695 349 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 AQP4P55087 323 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 PKNOX1P55347 436 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 FAM131AQ6UXB0 335 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 C3orf62Q6ZUJ4 267 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 TMC3Q7Z5M5 1100 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF557Q8N988 423 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 SLC35G2Q8TBE7 412 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 HEXDCQ8WVB3 486 aa7.03□□□□□ -1.28
TGFBR3-210ENST00000533089 ANKS1AQ92625 1134 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms