RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SLC9A4Q6AI14 798 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 C11orf63Q6NUN7 778 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SLC23A3Q6PIS1 610 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 NCEH1Q6PIU2 408 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 MFSD7Q6UXD7 560 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 MAP7D3Q8IWC1 876 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 RHOT1Q8IXI2 618 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 PLD5Q8N7P1 536 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 LRRC57Q8N9N7 239 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 TSEN2Q8NCE0 465 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 OR2T34Q8NGX1 318 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 LRIG1Q96JA1 1093 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 ZNF599Q96NL3 588 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 HDAC8Q9BY41 377 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 CPEB1Q9BZB8 566 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 CAPN10Q9HC96 672 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 LUC7LQ9NQ29 371 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 TRIM10Q9UDY6 481 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 EVLQ9UI08 416 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 FARP1Q9Y4F1 1045 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 DCHS1Q96JQ0 3298 aa14.15□□□□□ -0.14
TSPAN4-220ENST00000532375 SPTBN4Q9H254 2564 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 SPINT1O43278 529 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 LATO43561 262 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 CR2P20023 1033 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 ITGB7P26010 798 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 RECQLP46063 649 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 CSNK1DP48730 415 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 RHOAP61586 193 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 GBE1Q04446 702 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 RFTN1Q14699 578 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRC8AQ8IWT6 810 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 TEX26Q8N6G2 289 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 OR14C36Q8NHC7 312 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 GANCQ8TET4 914 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 KRT35Q92764 455 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 GDAP1L1Q96MZ0 367 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 TSGA13Q96PP4 275 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 PSKH2Q96QS6 385 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 KDM4CQ9H3R0 1056 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 DTLQ9NZJ0 730 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 EIF2B4Q9UI10 523 aaKnown RBP14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 ADGRG1Q9Y653 693 aa14.14□□□□□ -0.15
TSPAN4-220ENST00000532375 ASCC3Q8N3C0 2202 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 LNP1A1A4G5 178 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRD1A4D1F6 860 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 GRID2IPA4D2P6 1211 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 KRIT1O00522 736 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 WNT9AO14904 365 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PSTPIP1O43586 416 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 SPOPO43791 374 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 GJB3O75712 270 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PALMO75781 387 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 MAP3K6O95382 1288 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 SERPINB6P35237 376 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 GARSP41250 739 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 DPP6P42658 865 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 CDKN2BP42772 138 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PEX5P50542 639 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 CCR5P51681 352 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PPP2CBP62714 309 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PPP2CAP67775 309 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 CCZ1BP86790 482 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 CCZ1P86791 482 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 BNC1Q01954 994 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 ADCY2Q08462 1091 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 DUOXA1Q1HG43 343 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 ZNF805Q5CZA5 627 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 WDR45BQ5MNZ6 344 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 SYCP2LQ5T4T6 812 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRC49Q8IUZ0 686 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 KATNAL2Q8IYT4 538 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 FATE1Q969F0 183 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 ZDHHC6Q9H6R6 413 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 SP110Q9HB58 689 aa14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 DDX56Q9NY93 547 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-220ENST00000532375 A0A1W2PPC4 97 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 TSPAN11A1L157 253 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 FAM47DPA6NHR8 397 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 C16orf96A6NNT2 1141 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 CDX4O14627 284 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 AREL1O15033 823 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 KHNYNO15037 678 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 FOXD2O60548 495 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 FSBPO95073 299 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 IGSF6O95976 241 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 KRT1P04264 644 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 UGT2B4P06133 528 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 SERPINF2P08697 491 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 TNNT1P13805 278 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms