RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PRR11Q96HE9 360 aaPredicted RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 FEM1CQ96JP0 617 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 FAM81BQ96LP2 452 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 SLC46A1Q96NT5 459 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 TBCBQ99426 244 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 DPH1Q9BZG8 443 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 NAT10Q9H0A0 1025 aaKnown RBP17.65■□□□□ 0.42
PKP3-208ENST00000531857 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.65■□□□□ 0.42
PKP3-208ENST00000531857 ZNF212Q9UDV6 495 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 SSUH2Q9Y2M2 353 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 ENTPD2Q9Y5L3 495 aa17.65■□□□□ 0.42
PKP3-208ENST00000531857 AQP9O43315 295 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 SRGAP2O75044 1071 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 PON1P27169 355 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 KRT9P35527 623 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 SERPINH1P50454 418 aaKnown RBP17.64■□□□□ 0.41
PKP3-208ENST00000531857 DNA2P51530 1060 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 ARF5P84085 180 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 DEUP1Q05D60 604 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 PDE1CQ14123 709 aaPredicted RBP17.64■□□□□ 0.41
PKP3-208ENST00000531857 CARD16Q5EG05 197 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 IGF2-ASQ6U949 168 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 LRRC31Q6UY01 552 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 GBP6Q6ZN66 633 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 SNRNP27Q8WVK2 155 aaKnown RBP17.64■□□□□ 0.41
PKP3-208ENST00000531857 PGAP3Q96FM1 320 aaPredicted RBP17.64■□□□□ 0.41
PKP3-208ENST00000531857 C1orf74Q96LT6 269 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 HEPHQ9BQS7 1158 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 SIX2Q9NPC8 291 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 EVA1BQ9NVM1 165 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 ANO10Q9NW15 660 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 GGT7Q9UJ14 662 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 FCF1Q9Y324 198 aaKnown RBP17.64■□□□□ 0.41
PKP3-208ENST00000531857 CSNK1G3Q9Y6M4 447 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 PIEZO2Q9H5I5 2752 aa17.64■□□□□ 0.41
PKP3-208ENST00000531857 ILVBLA1L0T0 632 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 EME2A4GXA9 379 aaPredicted RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 IGLON5A6NGN9 336 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 CAPN8A6NHC0 703 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 H3BM21 787 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 PYCARD-AS1I3L0S3 204 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 FOXN3O00409 490 aaPredicted RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 CD160O95971 181 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 JUNDP17535 347 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 GKP32189 559 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 RABIFP47224 123 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 CCNHP51946 323 aaPredicted RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 SNX16P57768 344 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 SKOR1P84550 965 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 TYRO3Q06418 890 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 EIF2B5Q13144 721 aaKnown RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 PERM1Q5SV97 790 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 TRNP1Q6NT89 227 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 RETSATQ6NUM9 610 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 RBFAQ8N0V3 343 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 PCDH20Q8N6Y1 951 aaKnown RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 LMX1AQ8TE12 382 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 C1QTNF2Q9BXJ5 285 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 CEP44Q9C0F1 390 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 TCEAL2Q9H3H9 227 aaPredicted RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 ATP13A1Q9HD20 1204 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 IPO11Q9UI26 975 aaKnown RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 SALL4Q9UJQ4 1053 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 PNMA8BQ9ULN7 279 aaPredicted RBP17.63■□□□□ 0.41
PKP3-208ENST00000531857 STAP1Q9ULZ2 295 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 ITM2BQ9Y287 266 aa17.63■□□□□ 0.41
PKP3-208ENST00000531857 LRP4O75096 1905 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 FPGTO14772 594 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 AP1G1O43747 822 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 GCATO75600 419 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 F9P00740 461 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 KRT10P13645 584 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 RBMS1P29558 406 aaKnown RBP17.62■□□□□ 0.41
PKP3-208ENST00000531857 ABL2P42684 1182 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 SGCGQ13326 291 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 STX1AQ16623 288 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 EXOC3L4Q17RC7 722 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 KIAA1614Q5VZ46 1190 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 FOXR1Q6PIV2 292 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 ZDHHC17Q8IUH5 632 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 OR6K2Q8NGY2 324 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 VOPP1Q96AW1 172 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 LENG8Q96PV6 779 aaPredicted RBP17.62■□□□□ 0.41
PKP3-208ENST00000531857 TM6SF2Q9BZW4 377 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 ZDHHC6Q9H6R6 413 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 SCN8AQ9UQD0 1980 aa17.62■□□□□ 0.41
PKP3-208ENST00000531857 CYSRT1A8MQ03 144 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 MUSKO15146 869 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 FGFR1OPO95684 399 aaKnown RBP17.61■□□□□ 0.41
PKP3-208ENST00000531857 FLT3P36888 993 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 ACVRL1P37023 503 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 PFN3P60673 137 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 GNA12Q03113 381 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
PKP3-208ENST00000531857 SLC20A2Q08357 652 aa17.61■□□□□ 0.41
PKP3-208ENST00000531857 C1orf61Q13536 156 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms