RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 EDC3Q96F86 508 aaKnown RBP4.69□□□□□ -1.66
USP47-211ENST00000531513 SNX18Q96RF0 628 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 HDHD5Q9BXW7 423 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 TRIM31Q9BZY9 425 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 SMARCAD1Q9H4L7 1026 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 SFXN1Q9H9B4 322 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 B3GNT3Q9Y2A9 372 aa4.69□□□□□ -1.66
USP47-211ENST00000531513 MYMKA6NI61 221 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 MYO1GB0I1T2 1018 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 BCAT2O15382 392 aaPredicted RBP4.68□□□□□ -1.66
USP47-211ENST00000531513 APOA4P06727 396 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 CHRM4P08173 479 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 CLTBP09497 229 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 PKMP14618 531 aaKnown RBP4.68□□□□□ -1.66
USP47-211ENST00000531513 CDH2P19022 906 aaPredicted RBP4.68□□□□□ -1.66
USP47-211ENST00000531513 CPOXP36551 454 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 PPARGP37231 505 aaPredicted RBP4.68□□□□□ -1.66
USP47-211ENST00000531513 SLC37A1P57057 533 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 PSG6Q00889 435 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 CRYMQ14894 314 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 RASA2Q15283 850 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 SLC18A3Q16572 532 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 GPR139Q6DWJ6 353 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 TTI2Q6NXR4 508 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 CDC73Q6P1J9 531 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 TMEM81Q6P7N7 255 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 KLHL35Q6PF15 583 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 IRF2BP2Q7Z5L9 587 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 GALNT7Q86SF2 657 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 VPS52Q8N1B4 723 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 PLD5Q8N7P1 536 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 FRMD1Q8N878 549 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 PIGOQ8TEQ8 1089 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
USP47-211ENST00000531513 JAKMIP2Q96AA8 810 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 INTS12Q96CB8 462 aaKnown RBP4.68□□□□□ -1.66
USP47-211ENST00000531513 KLHL15Q96M94 604 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 IL1RAPL1Q9NZN1 696 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 HDAC6Q9UBN7 1215 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 MORF4L1Q9UBU8 362 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
USP47-211ENST00000531513 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 FAM237BA0A1B0GVD1 139 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 FRMD3A2A2Y4 597 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 POC1B-GALNT4F8VUJ3 575 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SH2B2O14492 632 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 DSCR3O14972 297 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 LDLRAD4O15165 306 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 CCNT1O60563 726 aaKnown RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 PDE8BO95263 885 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 CYP2A6P11509 494 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 HOXB9P17482 250 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 MCCP23508 829 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 ATP5F1P24539 256 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 CCKARP32238 428 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SLC8A1P32418 973 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 GJC1P36383 396 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 PBX3P40426 434 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 EIF2DP41214 584 aaKnown RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 GARSP41250 739 aaKnown RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 OLR1P78380 273 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 PRAMEP78395 509 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 B4GALNT1Q00973 533 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 LMAN2Q12907 356 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 LRMPQ12912 555 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 AIMP2Q13155 320 aaKnown RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 GAB1Q13480 694 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 PLCB4Q15147 1175 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 CERKLQ49MI3 558 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 GXYLT1Q4G148 440 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 ZNF667Q5HYK9 610 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SHC4Q6S5L8 630 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 C17orf99Q6UX52 265 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 MRPL10Q7Z7H8 261 aaKnown RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 TMEM200AQ86VY9 491 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SFTPA1Q8IWL2 248 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 ADGRF2Q8IZF7 708 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 TERB1Q8NA31 727 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SPATA3Q8NHX4 192 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 C2CD4CQ8TF44 421 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 POMGNT1Q8WZA1 660 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 CMTM3Q96MX0 182 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 RNF26Q9BY78 433 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 KAT14Q9H8E8 782 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SEMA5BQ9P283 1151 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 CHORDC1Q9UHD1 332 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 CDH22Q9UJ99 828 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 SLC25A13Q9UJS0 675 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 ZHX1Q9UKY1 873 aaPredicted RBP4.67□□□□□ -1.66
USP47-211ENST00000531513 ZNF711Q9Y462 761 aa4.67□□□□□ -1.66
USP47-211ENST00000531513 A0A1W2PQ09 198 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 TCRBV5S1A1TA0A578 114 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 C17orf100A8MU93 164 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 ADAM10O14672 748 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms