RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 UGT1A5P35504 534 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 SULT1E1P49888 294 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 STX17P56962 302 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 CCL7P80098 99 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 GCNT1Q02742 428 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 PDCLQ13371 301 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 MANEAQ5SRI9 462 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TPRG1LQ5T0D9 272 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 RETSATQ6NUM9 610 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 GJB7Q6PEY0 223 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-206ENST00000531430 FAM183BPQ6ZVS7 135 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 PHACTR4Q8IZ21 702 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 ZSCAN1Q8NBB4 408 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 OR6K2Q8NGY2 324 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 LMO3Q8TAP4 145 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
NEDD8-206ENST00000531430 NAT6Q93015 286 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 SGF29Q96ES7 293 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 GSDMAQ96QA5 445 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 SLC2A13Q96QE2 648 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 GFM1Q96RP9 751 aaKnown RBP9.41□□□□□ -0.9
NEDD8-206ENST00000531430 CPXM1Q96SM3 734 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 CRACR2AQ9BSW2 395 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TM6SF2Q9BZW4 377 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 SCAND2PQ9GZW5 306 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-206ENST00000531430 ATP13A1Q9HD20 1204 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 ITM2BQ9Y287 266 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 ACTL7AQ9Y615 435 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
NEDD8-206ENST00000531430 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 KRIT1O00522 736 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 P4HA2O15460 535 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 TSPAN6O43657 245 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 MMP20O60882 483 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 AFPP02771 609 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 RPLP0P05388 317 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 GLI1P08151 1106 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 ITGA2BP08514 1039 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 KRT9P35527 623 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 CLCN6P51797 869 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 CCNHP51946 323 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 MAPK10P53779 464 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 INHBCP55103 352 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 SNX16P57768 344 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 CYP4F2P78329 520 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 SLC6A3Q01959 620 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 PPARDQ03181 441 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 MTA1Q13330 715 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 EIF4EBP2Q13542 120 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 LRRC73Q5JTD7 316 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 ENPP7Q6UWV6 458 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 PARS2Q7L3T8 475 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 B3GNT8Q7Z7M8 397 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 VASH2Q86V25 355 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 ZNF354CQ86Y25 554 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 HID1Q8IV36 788 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 DRC7Q8IY82 874 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 SDR16C5Q8N3Y7 309 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 WDTC1Q8N5D0 677 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 WDR48Q8TAF3 677 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 JPH3Q8WXH2 748 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 TSACCQ96A04 125 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 DHTKD1Q96HY7 919 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 CPEB1Q9BZB8 566 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 SEPT10Q9P0V9 454 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 SEPT3Q9UH03 358 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 GGT7Q9UJ14 662 aa9.4□□□□□ -0.9
NEDD8-206ENST00000531430 HOOK1Q9UJC3 728 aaKnown RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 ATXN7L1Q9ULK2 861 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEDD8-206ENST00000531430 NYNRINQ9P2P1 1898 aaKnown RBP9.4□□□□□ -0.91
NEDD8-206ENST00000531430 LMO7DNF2Z398 122 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 TMX2-CTNND1H3BSU7 103 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ERBB2P04626 1255 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 UGT2B4P06133 528 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 CELA2BP08218 269 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ITIH2P19823 946 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 XPAP23025 273 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ITGB7P26010 798 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ABL2P42684 1182 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 SKOR1P84550 965 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 SLC20A2Q08357 652 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ZNF574Q6ZN55 896 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 CLEC14AQ86T13 490 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 SETD3Q86TU7 594 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-206ENST00000531430 ZFAND4Q86XD8 727 aa9.39□□□□□ -0.91
NEDD8-206ENST00000531430 DCAF4L2Q8NA75 395 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms