RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 URB1O60287 2271 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-211ENST00000531406 SPTY2D1-AS1A0A0U1RR47 76 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 NEMP2A6NFY4 417 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 IGLON5A6NGN9 336 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 EIF4E1BA6NMX2 242 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 C16orf96A6NNT2 1141 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM72CH0Y354 149 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 GOLGA6L19H0YKK7 550 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 K7ESM1 405 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 GFPT2O94808 682 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 RHOQP17081 205 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 CHRNB2P17787 502 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 ACTN2P35609 894 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 ETFBP38117 255 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 MAPKAPK2P49137 400 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 HNRNPKP61978 463 aaKnown RBP eCLIP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 CDR2Q01850 454 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 SGCGQ13326 291 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 C15orf59Q2T9L4 293 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM72AQ5TYM5 149 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 CDCP2Q5VXM1 449 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM72DQ6L9T8 149 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 RWDD4Q6NW29 188 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 NLRP14Q86W24 1093 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM72BQ86X60 149 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 FAM181AQ8N9Y4 354 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 ARHGEF2Q92974 986 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 RAB7BQ96AH8 199 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 LENG8Q96PV6 779 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 UBL7Q96S82 380 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 KLF6Q99612 283 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 TM6SF2Q9BZW4 377 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 OSBPL2Q9H1P3 480 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 NDFIP2Q9NV92 336 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 PCDHB1Q9Y5F3 818 aa13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 NYNRINQ9P2P1 1898 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-211ENST00000531406 LOC400499M0QZD8 3231 aa13.02□□□□□ -0.32
TM9SF1-211ENST00000531406 LY6G6EA0A0G2JKS1 128 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 KRIT1O00522 736 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 TSPAN6O43657 245 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 NEBLO76041 1014 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 CSF2P04141 144 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 GP1BAP07359 652 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 PLEKP08567 350 aaPredicted RBP13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 SDC4P31431 198 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 GKP32189 559 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 ABL2P42684 1182 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 PTPN9P43378 593 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 RABIFP47224 123 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 DUSP3P51452 185 aaPredicted RBP13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 GEMIN4P57678 1058 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 FMO1Q01740 532 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 MYL5Q02045 173 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 CDO1Q16878 200 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 MYLK3Q32MK0 819 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 ASB12Q8WXK4 309 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 CENPIQ92674 756 aaPredicted RBP13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 VOPP1Q96AW1 172 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 MAGEH1Q9H213 219 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 VPS16Q9H269 839 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 TMEM248Q9NWD8 314 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 IPO11Q9UI26 975 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 NEU3Q9UQ49 428 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 CSNK1G3Q9Y6M4 447 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 U3KQA8 63 aa13.02□□□□□ -0.33
TM9SF1-211ENST00000531406 SMG1Q96Q15 3661 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 NEMP1O14524 444 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 FPGTO14772 594 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 SPINT1O43278 529 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 RAMP2O60895 175 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 LRIG2O94898 1065 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 GJB6O95452 261 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 POP4O95707 220 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 GSRP00390 522 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 NME1P15531 152 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 KLK7P49862 253 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 JAM2P57087 298 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 POLD3Q15054 466 aaPredicted RBP13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
TM9SF1-211ENST00000531406 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms