RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TRIM38O00635 465 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 BUB1O43683 1085 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 SIGLEC6O43699 453 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 KDELR3O43731 214 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 POP4O95707 220 aaKnown RBP22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 GSRP00390 522 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 DESP17661 470 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 EPHB2P29323 1055 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 GKP32189 559 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZNF143P52747 638 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 MYLK3Q32MK0 819 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 ZNF805Q5CZA5 627 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 GCNT7Q6ZNI0 430 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 MON1BQ7L1V2 547 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 PTAR1Q7Z6K3 402 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 OR2AP1Q8NGE2 309 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 RAB7BQ96AH8 199 aa22.65■■□□□ 1.22
TRAPPC4-210ENST00000531290 TSPAN6O43657 245 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 FERP16591 822 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 CLDN6P56747 220 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 TARDBPQ13148 414 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 PROX2Q3B8N5 592 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 HES3Q5TGS1 186 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 CAVIN1Q6NZI2 390 aaKnown RBP22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 DCUN1D2Q6PH85 259 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 IFT43Q96FT9 208 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 BMFQ96LC9 184 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 MCEEQ96PE7 176 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 OSBPL1AQ9BXW6 950 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 IPO11Q9UI26 975 aaKnown RBP22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 NEU3Q9UQ49 428 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 PKD1L2Q7Z442 2459 aa22.64■■□□□ 1.21
TRAPPC4-210ENST00000531290 CCP110O43303 1012 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 ALPPL2P10696 532 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 ACP1P24666 158 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 DAB2P98082 770 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 RAD51Q06609 339 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 NCAPHQ15003 741 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 ACAD10Q6JQN1 1059 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 PYROXD2Q8N2H3 581 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 RTL3Q8N8U3 475 aaKnown RBP22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 OR4C6Q8NH72 309 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 HNRNPLLQ8WVV9 542 aaKnown RBP22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 ARHGEF26Q96DR7 871 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 EPAS1Q99814 870 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 CNPY3Q9BT09 278 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 UCKL1Q9NWZ5 548 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 DNAJC28Q9NX36 388 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 TMEM63CQ9P1W3 806 aa22.63■■□□□ 1.21
TRAPPC4-210ENST00000531290 NEMP2A6NFY4 417 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 IGLON5A6NGN9 336 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 FPGTO14772 594 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 FFAR2O15552 330 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 CREB3O43889 395 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 PIAS2O75928 621 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 UGT2B4P06133 528 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 RABIFP47224 123 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 AIF1P55008 147 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 YBEYP58557 167 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 HNRNPKP61978 463 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 RPL7AP62424 266 aaKnown RBP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 E2F1Q01094 437 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 FGL2Q14314 439 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 COL28A1Q2UY09 1125 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 ZNF542PQ5EBM4 170 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 KYAT3Q6YP21 454 aaKnown RBP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 APTXQ7Z2E3 356 aaKnown RBP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 TTC7BQ86TV6 843 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 SLC22A18ASQ8N1D0 253 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 AOPEPQ8N6M6 819 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 CASKIN2Q8WXE0 1202 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 NXPE2Q96DL1 559 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 GDAP1L1Q96MZ0 367 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 KLHL32Q96NJ5 620 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 LENG8Q96PV6 779 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 C1QTNF2Q9BXJ5 285 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 CATSPERBQ9H7T0 1116 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 AK5Q9Y6K8 562 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 TMEM131Q92545 1883 aa22.62■■□□□ 1.21
TRAPPC4-210ENST00000531290 FAM208BQ5VWN6 2430 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 POM121BA6NF01 834 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 RAD51BO15315 384 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 TMCC1O94876 653 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 TNFAIP3P21580 790 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 ABL2P42684 1182 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 TYRO3Q06418 890 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 INO80DQ53TQ3 878 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 ATXN7L2Q5T6C5 722 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 GDPD4Q6W3E5 623 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 MCOLN2Q8IZK6 566 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 TTYH3Q9C0H2 523 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 DONSONQ9NYP3 566 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 FZD10Q9ULW2 581 aa22.61■■□□□ 1.21
TRAPPC4-210ENST00000531290 TCRBV5S1A1TA0A578 114 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 IGSF6O95976 241 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 ATP1A3P13637 1013 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 RHOAP61586 193 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 PARP15Q460N3 678 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 PPP1R2P3Q6NXS1 205 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 TMC6Q7Z403 805 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms