RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NDFIP2Q9NV92 336 aa17.43■□□□□ 0.38
BRCA2-204ENST00000530893 IPO11Q9UI26 975 aaKnown RBP17.43■□□□□ 0.38
BRCA2-204ENST00000530893 FAM95CA0A1B0GW59 222 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 A0A1W2PQH9 124 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 MEI4A8MW99 385 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 PHGDHO43175 533 aaKnown RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 DCXO43602 365 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SMNDC1O75940 238 aaKnown RBP eCLIP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 COX4I1P13073 169 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 ARNTP27540 789 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SERPINB5P36952 375 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 CD151P48509 253 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 RENBPP51606 427 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 POU4F1Q01851 419 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SLC9B1Q4ZJI4 515 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SLC39A12Q504Y0 691 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 ANO7Q6IWH7 933 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 IRGCQ6NXR0 463 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 NUP93Q8N1F7 819 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 NDE1Q9NXR1 346 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 NOD1Q9Y239 953 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 PLXNA3P51805 1871 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 HEATR9A2RTY3 570 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 F7P08709 466 aaPredicted RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 RHOQP17081 205 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 KLF10Q13118 480 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 ACBD5Q5T8D3 534 aaPredicted RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SETD3Q86TU7 594 aaPredicted RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 APLFQ8IW19 511 aaPredicted RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 DENND6AQ8IWF6 608 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 KCTD4Q8WVF5 259 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 FAM136AQ96C01 138 aa17.42■□□□□ 0.38
BRCA2-204ENST00000530893 ZNF184Q99676 751 aaPredicted RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 MRPL46Q9H2W6 279 aaKnown RBP17.42■□□□□ 0.38
BRCA2-204ENST00000530893 CA12O43570 354 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 PMPCBO75439 489 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 THRAP10827 490 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 SAT1P21673 171 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 SLC1A2P43004 574 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 PGFP49763 221 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 FLT3LGP49771 235 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 DSC1Q08554 894 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 ILF2Q12905 390 aaKnown RBP17.41■□□□□ 0.38
BRCA2-204ENST00000530893 CTBP1Q13363 440 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 CNGA3Q16281 694 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 ARL13AQ5H913 290 aaPredicted RBP17.41■□□□□ 0.38
BRCA2-204ENST00000530893 ACAD11Q709F0 780 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 TMC7Q7Z402 723 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 SCN4BQ8IWT1 228 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 PHTF2Q8N3S3 785 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 MAPK15Q8TD08 544 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 GPR78Q96P69 363 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 MRPL57Q9BQC6 102 aaKnown RBP17.41■□□□□ 0.38
BRCA2-204ENST00000530893 CCDC28BQ9BUN5 200 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 OSBPL1AQ9BXW6 950 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 TRPV6Q9H1D0 765 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 CDH22Q9UJ99 828 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
BRCA2-204ENST00000530893 CCDC78A2IDD5 438 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 E9PBE3 544 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ZBTB14O43829 449 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 NPHS1O60500 1241 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 KLHL41O60662 606 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PAPSS2O95340 614 aaPredicted RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PIGNO95427 931 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MOCS2O96007 188 aaPredicted RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 TFEBP19484 476 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 NAGLUP54802 743 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 SLC12A2P55011 1212 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MPP1Q00013 466 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 TNK2Q07912 1038 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 CACNB2Q08289 660 aaPredicted RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ITGA7Q13683 1181 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 KDELC1Q6UW63 502 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 FRMD7Q6ZUT3 714 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 GALNT7Q86SF2 657 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 CPSF7Q8N684 471 aaKnown RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 IMP4Q96G21 291 aaKnown RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ZYG11BQ9C0D3 744 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ATP13A1Q9HD20 1204 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MRGBPQ9NV56 204 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 TMEM248Q9NWD8 314 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ABI2Q9NYB9 513 aaPredicted RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 XPR1Q9UBH6 696 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 FBXO5Q9UKT4 447 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 GABRQQ9UN88 632 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MYLKQ15746 1914 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 A6NHS1 94 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 KIF1CO43896 1103 aaKnown RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PEX11BO96011 259 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 CHRNGP07510 517 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ITGAXP20702 1163 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MPSTP25325 297 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms