RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DNAJC18Q9H819 358 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 HELLSQ9NRZ9 838 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 GJD2Q9UKL4 321 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 ATAD5Q96QE3 1844 aa7.71□□□□□ -1.18
CSDE1-213ENST00000530784 C2CD4BA6NLJ0 364 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 PCDH17O14917 1159 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 NPC1O15118 1278 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 IDH1O75874 414 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 PRF1P14222 555 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 CYP2B6P20813 491 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 MAPK4P31152 587 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 DYNLL1P63167 89 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 MTA1Q13330 715 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 HDAC1Q13547 482 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 SHROOM1Q2M3G4 852 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 DGKKQ5KSL6 1271 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 ARL6IP4Q66PJ3 421 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 TTC30AQ86WT1 665 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 NRACQ8N912 160 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 GLMPQ8WWB7 406 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 TRMT61AQ96FX7 289 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 SENP7Q9BQF6 1050 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 SCNM1Q9BWG6 230 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 ZNF700Q9H0M5 742 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 C11orf49Q9H6J7 331 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 PIH1D3Q9NQM4 214 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 IGSF9Q9P2J2 1179 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 DBNLQ9UJU6 430 aaKnown RBP7.7□□□□□ -1.18
CSDE1-213ENST00000530784 SIPA1L1O43166 1804 aa7.7□□□□□ -1.18
CSDE1-213ENST00000530784 SLC22A23A1A5C7 686 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 GH2P01242 217 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 ITGA5P08648 1049 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 CD63P08962 238 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 ST6GAL1P15907 406 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 RGS2P41220 211 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 STAT6P42226 847 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 CPA2P48052 419 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 PLCD1P51178 756 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 ZNF84P51523 738 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 CSHL1Q14406 222 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 GRM4Q14833 912 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 MAP3K21Q5TCX8 1036 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 RBM44Q6ZP01 1051 aaKnown RBP7.69□□□□□ -1.18
CSDE1-213ENST00000530784 MRPL10Q7Z7H8 261 aaKnown RBP7.69□□□□□ -1.18
CSDE1-213ENST00000530784 ITPRIPQ8IWB1 547 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 Q8N9P0 234 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-213ENST00000530784 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-213ENST00000530784 GJA10Q969M2 543 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 MUL1Q969V5 352 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 ELAC2Q9BQ52 826 aaKnown RBP7.69□□□□□ -1.18
CSDE1-213ENST00000530784 PAGR1Q9BTK6 254 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 TXNRD2Q9NNW7 524 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 FBXO28Q9NVF7 368 aa7.69□□□□□ -1.18
CSDE1-213ENST00000530784 PIP5K1BO14986 540 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 RPS6KB1P23443 525 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 SLC8A1P32418 973 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 TRIM71Q2Q1W2 868 aaKnown RBP7.68□□□□□ -1.18
CSDE1-213ENST00000530784 TATDN1Q6P1N9 297 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 TMED8Q6PL24 325 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-213ENST00000530784 GPR142Q7Z601 462 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 ANKRD13BQ86YJ7 626 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 RFX6Q8HWS3 928 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 SYTL1Q8IYJ3 562 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 SVIPQ8NHG7 77 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 SLC22A17Q8WUG5 538 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 NPIPB3Q92617 1050 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 MCRS1Q96EZ8 462 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 ZNF845Q96IR2 970 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-213ENST00000530784 C12orf42Q96LP6 360 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 PORCNQ9H237 461 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 NLRC4Q9NPP4 1024 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 CDC23Q9UJX2 597 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 PCDHB7Q9Y5E2 793 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 ZMYM2Q9UBW7 1377 aa7.68□□□□□ -1.18
CSDE1-213ENST00000530784 DDX60LQ5H9U9 1706 aaKnown RBP7.67□□□□□ -1.18
CSDE1-213ENST00000530784 FOCADQ5VW36 1801 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 CCDC194A0A1B0GVG4 234 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 GXYLT2A0PJZ3 443 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 SOCS2O14508 198 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 CNOT3O75175 753 aaKnown RBP7.67□□□□□ -1.18
CSDE1-213ENST00000530784 GLP2RO95838 553 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 ANXA6P08133 673 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 CCNA1P78396 465 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 CCL14Q16627 93 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 WDR78Q5VTH9 848 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 XRRA1Q6P2D8 792 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 PIP4P1Q86T03 277 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 AACSQ86V21 672 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 SKAP1Q86WV1 359 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 ERC1Q8IUD2 1116 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 LAS2Q8IYD9 372 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 ASB12Q8WXK4 309 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 USP6NLQ92738 828 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 HMCESQ96FZ2 354 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 PAAF1Q9BRP4 392 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 RABGAP1Q9Y3P9 1069 aa7.67□□□□□ -1.18
CSDE1-213ENST00000530784 PFASO15067 1338 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms