RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ACP1P24666 158 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 CLDN2P57739 230 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 SNRPD1P62314 119 aaKnown RBP21.26■□□□□ 0.99
SMPD1-204ENST00000530395 ZNF211Q13398 564 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-204ENST00000530395 PROX2Q3B8N5 592 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 EFHC2Q5JST6 749 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 FAM72AQ5TYM5 149 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 FAM72DQ6L9T8 149 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 DNAJC24Q6P3W2 148 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 PARS2Q7L3T8 475 aaKnown RBP21.26■□□□□ 0.99
SMPD1-204ENST00000530395 SLFN11Q7Z7L1 901 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 FAM72BQ86X60 149 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 ZNF354CQ86Y25 554 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 IFT43Q96FT9 208 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 SCUBE2Q9NQ36 999 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 ACTL7AQ9Y615 435 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 ZSCAN5CA6NGD5 496 aaPredicted RBP21.25■□□□□ 0.99
SMPD1-204ENST00000530395 SIGLEC6O43699 453 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 CD160O95971 181 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 ALPPL2P10696 532 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 DESP17661 470 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 DAB2P98082 770 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 C1QBPQ07021 282 aaKnown RBP21.25■□□□□ 0.99
SMPD1-204ENST00000530395 COL28A1Q2UY09 1125 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 WDR59Q6PJI9 974 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 KYAT3Q6YP21 454 aaKnown RBP21.25■□□□□ 0.99
SMPD1-204ENST00000530395 Q6ZSR6 202 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 SLC22A18ASQ8N1D0 253 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 SLC25A45Q8N413 288 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 OR2AP1Q8NGE2 309 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 OR6K2Q8NGY2 324 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 OR4C6Q8NH72 309 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 ERGIC2Q96RQ1 377 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 AGPAT1Q99943 283 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 OSBPL1AQ9BXW6 950 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 NEU3Q9UQ49 428 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 IGSF10Q6WRI0 2623 aa21.25■□□□□ 0.99
SMPD1-204ENST00000530395 SIGLEC16A6NMB1 481 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 C16orf96A6NNT2 1141 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 KRIT1O00522 736 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 TRIM38O00635 465 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 NEMP1O14524 444 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 TSPAN6O43657 245 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 CCDC172P0C7W6 258 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 CLDN6P56747 220 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 TARDBPQ13148 414 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMPD1-204ENST00000530395 SGCGQ13326 291 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 ZNF805Q5CZA5 627 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 MON1BQ7L1V2 547 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 ARHGEF26Q96DR7 871 aa21.24■□□□□ 0.99
SMPD1-204ENST00000530395 NEMP2A6NFY4 417 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 FFAR2O15552 330 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 CCP110O43303 1012 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 BUB1O43683 1085 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 KDELR3O43731 214 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 PIAS2O75928 621 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 POP4O95707 220 aaKnown RBP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 PAK4O96013 591 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 EPHB2P29323 1055 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 RABIFP47224 123 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 ZNF143P52747 638 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 HNRNPKP61978 463 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 E2F1Q01094 437 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 SCYL2Q6P3W7 929 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 RTL3Q8N8U3 475 aaKnown RBP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 HNRNPLLQ8WVV9 542 aaKnown RBP21.23■□□□□ 0.99
SMPD1-204ENST00000530395 CASKIN2Q8WXE0 1202 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 GDAP1L1Q96MZ0 367 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 MCEEQ96PE7 176 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 EPAS1Q99814 870 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 MAGEB5Q9BZ81 275 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 EVA1BQ9NVM1 165 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 UCKL1Q9NWZ5 548 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 DNAJC28Q9NX36 388 aa21.23■□□□□ 0.99
SMPD1-204ENST00000530395 LOC400499M0QZD8 3231 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 LRRC10BA6NIK2 292 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 H3BM21 787 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 FPGTO14772 594 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 UGT2B4P06133 528 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 FERP16591 822 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 GKP32189 559 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 AIF1P55008 147 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 RAD51Q06609 339 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 FGL2Q14314 439 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 MYLK3Q32MK0 819 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 DCUN1D2Q6PH85 259 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 LEKR1Q6ZMV7 388 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 PDZD3Q86UT5 571 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 CACTIN-AS1Q8N1I8 211 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 DENND6BQ8NEG7 585 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 RFFLQ8WZ73 363 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 BMFQ96LC9 184 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 LENG8Q96PV6 779 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-204ENST00000530395 CATSPERBQ9H7T0 1116 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 GPR27Q9NS67 375 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 NLGN3Q9NZ94 848 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 IPO11Q9UI26 975 aaKnown RBP21.22■□□□□ 0.99
SMPD1-204ENST00000530395 CLCA2Q9UQC9 943 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 AK5Q9Y6K8 562 aa21.22■□□□□ 0.99
SMPD1-204ENST00000530395 POM121BA6NF01 834 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms